RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
GCN1-203ENST00000547369 COMMD7Q86VX2 200 aa10.77□□□□□ -0.69
GCN1-203ENST00000547369 BAGE3Q86Y29 109 aa10.77□□□□□ -0.69
GCN1-203ENST00000547369 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
GCN1-203ENST00000547369 TRAPPC1Q9Y5R8 145 aa10.77□□□□□ -0.69
GCN1-203ENST00000547369 CBLN2Q8IUK8 224 aa10.76□□□□□ -0.69
GCN1-203ENST00000547369 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
GCN1-203ENST00000547369 IGLV7-46A0A075B6I9 117 aa10.74□□□□□ -0.69
GCN1-203ENST00000547369 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
GCN1-203ENST00000547369 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
GCN1-203ENST00000547369 CDIP1Q9H305 208 aa10.74□□□□□ -0.69
GCN1-203ENST00000547369 LINC00158P58513 81 aa10.73□□□□□ -0.69
GCN1-203ENST00000547369 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
GCN1-203ENST00000547369 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
GCN1-203ENST00000547369 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
GCN1-203ENST00000547369 SPRR4Q96PI1 79 aa10.69□□□□□ -0.7
GCN1-203ENST00000547369 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
GCN1-203ENST00000547369 SPAG11AQ6PDA7 123 aa10.68□□□□□ -0.7
GCN1-203ENST00000547369 KRTAP9-2Q9BYQ4 174 aa10.67□□□□□ -0.7
GCN1-203ENST00000547369 PPDPFQ9H3Y8 114 aa10.67□□□□□ -0.7
GCN1-203ENST00000547369 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
GCN1-203ENST00000547369 PRYO14603 147 aa10.65□□□□□ -0.7
GCN1-203ENST00000547369 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
GCN1-203ENST00000547369 MUC17Q685J3 4493 aa10.65□□□□□ -0.7
GCN1-203ENST00000547369 FAT4Q6V0I7 4981 aa10.65□□□□□ -0.71
GCN1-203ENST00000547369 TRAV12-1A0A0B4J245 112 aa10.64□□□□□ -0.71
GCN1-203ENST00000547369 ATP6V1G1O75348 118 aa10.64□□□□□ -0.71
GCN1-203ENST00000547369 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
GCN1-203ENST00000547369 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
GCN1-203ENST00000547369 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
GCN1-203ENST00000547369 NCR3O14931 201 aa10.62□□□□□ -0.71
GCN1-203ENST00000547369 SPRR1AP35321 89 aa10.62□□□□□ -0.71
GCN1-203ENST00000547369 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
GCN1-203ENST00000547369 LINC00337Q8N6G1 96 aa10.62□□□□□ -0.71
GCN1-203ENST00000547369 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
GCN1-203ENST00000547369 APOC3P02656 99 aa10.61□□□□□ -0.71
GCN1-203ENST00000547369 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
GCN1-203ENST00000547369 MIR7-3HGQ8N6C7 128 aa10.61□□□□□ -0.71
GCN1-203ENST00000547369 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
GCN1-203ENST00000547369 HERV-K104P63124 156 aa10.6□□□□□ -0.71
GCN1-203ENST00000547369 SMCR5Q8TEV8 140 aa10.6□□□□□ -0.71
GCN1-203ENST00000547369 SNAPINO95295 136 aa10.59□□□□□ -0.71
GCN1-203ENST00000547369 DAND5Q8N907 189 aa10.59□□□□□ -0.71
GCN1-203ENST00000547369 Q8NBF4 154 aa10.59□□□□□ -0.71
GCN1-203ENST00000547369 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
GCN1-203ENST00000547369 LINC00587B1AMM8 73 aa10.58□□□□□ -0.72
GCN1-203ENST00000547369 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
GCN1-203ENST00000547369 SVBPQ8N300 66 aa10.57□□□□□ -0.72
GCN1-203ENST00000547369 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
GCN1-203ENST00000547369 TRBV10-3A0A0K0K1G6 114 aa10.56□□□□□ -0.72
GCN1-203ENST00000547369 NDUFA5Q16718 116 aa10.56□□□□□ -0.72
GCN1-203ENST00000547369 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
GCN1-203ENST00000547369 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
GCN1-203ENST00000547369 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
GCN1-203ENST00000547369 SPINK1P00995 79 aa10.54□□□□□ -0.72
GCN1-203ENST00000547369 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
GCN1-203ENST00000547369 HSBP1O75506 76 aa10.53□□□□□ -0.72
GCN1-203ENST00000547369 S100A12P80511 92 aa10.53□□□□□ -0.72
GCN1-203ENST00000547369 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
GCN1-203ENST00000547369 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
GCN1-203ENST00000547369 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
GCN1-203ENST00000547369 B5MCH6 92 aa10.51□□□□□ -0.73
GCN1-203ENST00000547369 H0Y8G0 127 aa10.5□□□□□ -0.73
GCN1-203ENST00000547369 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
GCN1-203ENST00000547369 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
GCN1-203ENST00000547369 ERC2-IT1O76042 136 aa10.49□□□□□ -0.73
GCN1-203ENST00000547369 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
GCN1-203ENST00000547369 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
GCN1-203ENST00000547369 LEPROTO15243 131 aa10.48□□□□□ -0.73
GCN1-203ENST00000547369 DDTP30046 118 aa10.48□□□□□ -0.73
GCN1-203ENST00000547369 MOBPQ13875 183 aa10.48□□□□□ -0.73
GCN1-203ENST00000547369 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
GCN1-203ENST00000547369 IGLV9-49A0A0B4J1Y8 123 aa10.47□□□□□ -0.73
GCN1-203ENST00000547369 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
GCN1-203ENST00000547369 Q9BRP9 147 aa10.46□□□□□ -0.73
GCN1-203ENST00000547369 LEPROTL1O95214 131 aa10.45□□□□□ -0.74
GCN1-203ENST00000547369 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
GCN1-203ENST00000547369 Q6ZRX8 168 aa10.45□□□□□ -0.74
GCN1-203ENST00000547369 J3QQQ9 107 aa10.44□□□□□ -0.74
GCN1-203ENST00000547369 PLNP26678 52 aa10.44□□□□□ -0.74
GCN1-203ENST00000547369 Q8N377 158 aa10.44□□□□□ -0.74
GCN1-203ENST00000547369 MIEN1Q9BRT3 115 aa10.44□□□□□ -0.74
GCN1-203ENST00000547369 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
GCN1-203ENST00000547369 LINC00310P59036 64 aa10.42□□□□□ -0.74
GCN1-203ENST00000547369 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
GCN1-203ENST00000547369 HERVK_113P61574 105 aa10.42□□□□□ -0.74
GCN1-203ENST00000547369 SERF1AO75920 110 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 NDUFC2O95298 119 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 IGLV6-57P01721 117 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 TRGC2P03986 189 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 NMUP48645 174 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
GCN1-203ENST00000547369 SLC25A20O43772 301 aa10.4□□□□□ -0.74
GCN1-203ENST00000547369 DPM2O94777 84 aa10.4□□□□□ -0.74
GCN1-203ENST00000547369 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
GCN1-203ENST00000547369 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.74
GCN1-203ENST00000547369 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
GCN1-203ENST00000547369 TRAV23DV6A0A075B6W5 121 aa10.38□□□□□ -0.75
GCN1-203ENST00000547369 KRTAP9-6A0A140TA67 174 aa10.38□□□□□ -0.75
GCN1-203ENST00000547369 IGKCP01834 107 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms