RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
YBX3-218ENST00000546298 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
YBX3-218ENST00000546298 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
YBX3-218ENST00000546298 PRR4Q16378 134 aa5.56□□□□□ -1.52
YBX3-218ENST00000546298 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
YBX3-218ENST00000546298 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
YBX3-218ENST00000546298 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
YBX3-218ENST00000546298 CHTOPQ9Y3Y2 248 aaKnown RBP5.56□□□□□ -1.52
YBX3-218ENST00000546298 IGKV2-28A0A075B6P5 120 aa5.55□□□□□ -1.52
YBX3-218ENST00000546298 IGKV2D-28P01615 120 aa5.55□□□□□ -1.52
YBX3-218ENST00000546298 VPREB1P12018 145 aa5.55□□□□□ -1.52
YBX3-218ENST00000546298 ZNF625Q96I27 306 aaPredicted RBP5.55□□□□□ -1.52
YBX3-218ENST00000546298 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
YBX3-218ENST00000546298 TRAV12-1A0A0B4J245 112 aa5.54□□□□□ -1.52
YBX3-218ENST00000546298 LINC00158P58513 81 aa5.54□□□□□ -1.52
YBX3-218ENST00000546298 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
YBX3-218ENST00000546298 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
YBX3-218ENST00000546298 A0A087X002 238 aa5.53□□□□□ -1.52
YBX3-218ENST00000546298 TSPAN13O95857 204 aa5.53□□□□□ -1.52
YBX3-218ENST00000546298 FAM19A1Q7Z5A9 133 aa5.53□□□□□ -1.52
YBX3-218ENST00000546298 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
YBX3-218ENST00000546298 TMEM223A0PJW6 202 aa5.52□□□□□ -1.53
YBX3-218ENST00000546298 LINC00587B1AMM8 73 aa5.52□□□□□ -1.53
YBX3-218ENST00000546298 SCO1O75880 301 aa5.52□□□□□ -1.53
YBX3-218ENST00000546298 TMEM126AQ9H061 195 aa5.52□□□□□ -1.53
YBX3-218ENST00000546298 IGKV2D-26A0A0A0MRZ7 120 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 M0R378 163 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 HSBP1O75506 76 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 HERV-K104P63124 156 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 PRLHP81277 87 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 YPEL4Q96NS1 127 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 ANAPC11Q9NYG5 84 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 TNXBP22105 4242 aa5.51□□□□□ -1.53
YBX3-218ENST00000546298 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
YBX3-218ENST00000546298 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
YBX3-218ENST00000546298 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
YBX3-218ENST00000546298 A0A0U1RRA0 63 aa5.49□□□□□ -1.53
YBX3-218ENST00000546298 CTAG1AP78358 180 aa5.49□□□□□ -1.53
YBX3-218ENST00000546298 LRP2P98164 4655 aa5.49□□□□□ -1.53
YBX3-218ENST00000546298 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
YBX3-218ENST00000546298 MAP1LC3CQ9BXW4 147 aa5.49□□□□□ -1.53
YBX3-218ENST00000546298 MYMXA0A1B0GTQ4 84 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 KRTAP13-2Q52LG2 175 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 FAM19A2Q8N3H0 131 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
YBX3-218ENST00000546298 LEPROTL1O95214 131 aa5.47□□□□□ -1.53
YBX3-218ENST00000546298 S100A12P80511 92 aa5.47□□□□□ -1.53
YBX3-218ENST00000546298 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
YBX3-218ENST00000546298 Q8NDZ9 215 aa5.47□□□□□ -1.53
YBX3-218ENST00000546298 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
YBX3-218ENST00000546298 H0Y8G0 127 aa5.46□□□□□ -1.54
YBX3-218ENST00000546298 PRYO14603 147 aa5.46□□□□□ -1.54
YBX3-218ENST00000546298 TRGC2P03986 189 aa5.46□□□□□ -1.54
YBX3-218ENST00000546298 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
YBX3-218ENST00000546298 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
YBX3-218ENST00000546298 PLNP26678 52 aa5.45□□□□□ -1.54
YBX3-218ENST00000546298 HERVK_113P61574 105 aa5.45□□□□□ -1.54
YBX3-218ENST00000546298 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
YBX3-218ENST00000546298 LOC105371267A0A1B0GV96 52 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 LEPROTO15243 131 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 SERF1AO75920 110 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 SPAG11AQ6PDA7 123 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 LINC00337Q8N6G1 96 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 SPRR4Q96PI1 79 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 KCNQ1DNQ9H478 68 aa5.44□□□□□ -1.54
YBX3-218ENST00000546298 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
YBX3-218ENST00000546298 NCR3O14931 201 aa5.43□□□□□ -1.54
YBX3-218ENST00000546298 DPM2O94777 84 aa5.43□□□□□ -1.54
YBX3-218ENST00000546298 SPRR1AP35321 89 aa5.43□□□□□ -1.54
YBX3-218ENST00000546298 NMUP48645 174 aa5.43□□□□□ -1.54
YBX3-218ENST00000546298 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 LOC107984156A0A0G2JMH3 177 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 J3QQQ9 107 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 FABP4P15090 132 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 LGALS3P17931 250 aaKnown RBP5.42□□□□□ -1.54
YBX3-218ENST00000546298 ARL17AQ8IVW1 177 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 MIEN1Q9BRT3 115 aa5.42□□□□□ -1.54
YBX3-218ENST00000546298 TRBV10-2A0A0K0K1G8 114 aa5.41□□□□□ -1.54
YBX3-218ENST00000546298 IGKCP01834 107 aa5.41□□□□□ -1.54
YBX3-218ENST00000546298 C3orf22Q8N5N4 141 aa5.41□□□□□ -1.54
YBX3-218ENST00000546298 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
YBX3-218ENST00000546298 DDTP30046 118 aa5.4□□□□□ -1.54
YBX3-218ENST00000546298 LINC00310P59036 64 aa5.4□□□□□ -1.54
YBX3-218ENST00000546298 TSPEAR-AS2P59090 65 aa5.4□□□□□ -1.54
YBX3-218ENST00000546298 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
YBX3-218ENST00000546298 COLCA2A8K830 154 aa5.39□□□□□ -1.55
YBX3-218ENST00000546298 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
YBX3-218ENST00000546298 NDUFC2O95298 119 aa5.39□□□□□ -1.55
YBX3-218ENST00000546298 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
YBX3-218ENST00000546298 DAND5Q8N907 189 aa5.39□□□□□ -1.55
YBX3-218ENST00000546298 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
YBX3-218ENST00000546298 B5MCH6 92 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms