RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	TMEM262	E9PQX1	116 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	SFTA3	P0C7M3	94 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	SLC25A6	P12236	298 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	AKR1C3	P42330	323 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	PDE6H	Q13956	83 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	CIRBP	Q14011	172 aa	Known RBP	1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	ZNF345	Q14585	488 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	SURF2	Q15527	256 aa	Predicted RBP	1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	RNASE10	Q5GAN6	216 aa	Known RBP	1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	CYP2G1P	Q6ZSU1	146 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	LINC00305	Q7Z4B0	112 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	TP53RK	Q96S44	253 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	PFDN5	Q99471	154 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	PLAC8	Q9NZF1	115 aa		1.75	□□□□□ -2.13
SNHG1-222	ENST00000545308	RBAKDN	A6NC62	111 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	MAP1LC3B2	A6NCE7	125 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308		A8MWV9	139 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	TSTD3	H0UI37	97 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	CNBP	P62633	177 aa	Known RBP	1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	SSBP1	Q04837	148 aa	Known RBP	1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	WFDC2	Q14508	124 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	FAM74A1	Q5RGS3	127 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	C10orf113	Q5VZT2	155 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	EIF5AL1	Q6IS14	154 aa	Known RBP	1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	AKAP14	Q86UN6	197 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	TSKU	Q8WUA8	353 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	DIRC1	Q969H9	104 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	GGACT	Q9BVM4	153 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	MAP1LC3B	Q9GZQ8	125 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	FXYD6	Q9H0Q3	95 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	LAMTOR3	Q9UHA4	124 aa		1.74	□□□□□ -2.13
SNHG1-222	ENST00000545308	TRAV21	A0A0B4J279	112 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	ANG	P03950	147 aa	Known RBP	1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	SDC2	P34741	201 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	UBE2D1	P51668	147 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308		Q6AWC8	147 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	EXOC3-AS1	Q8N2X6	119 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	SLC25A21	Q9BQT8	299 aa	Predicted RBP	1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	CCDC32	Q9BV29	185 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	AGPAT4-IT1	Q9H0P7	198 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	NAA60	Q9H7X0	242 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	OR5AC2	Q9NZP5	309 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	SCP2D1	Q9UJQ7	156 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308	FAT4	Q6V0I7	4981 aa		1.73	□□□□□ -2.13
SNHG1-222	ENST00000545308		F8W036	122 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	TMEM256-PLSCR3	K7ERE1	68 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	TIMM17B	O60830	172 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	S100A10	P60903	97 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	MRPS10	P82664	201 aa	Known RBP	1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	CFAP126	Q5VTH2	177 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308		Q6ZQT0	140 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	TMEM229B	Q8NBD8	167 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	OR5H6	Q8NGV6	325 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	NPCDR1	Q9BY65	106 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	PSENEN	Q9NZ42	101 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	TMEM14C	Q9P0S9	112 aa		1.72	□□□□□ -2.13
SNHG1-222	ENST00000545308	MUC2	Q02817	5179 aa		1.71	□□□□□ -2.13
SNHG1-222	ENST00000545308	TRBV7-3	A0A075B6L6	115 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	TRBV10-1	A0A0K0K1A3	114 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	MT-ND6	P03923	174 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	CD3D	P04234	171 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	NBEAP1	P0C6P0	100 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	AKAIN1	P0CW23	69 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	IGLC2	P0DOY2	106 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	IAPP	P10997	89 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	KRTAP12-1	P59990	96 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	COX6A2	Q02221	97 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	KRTAP13-4	Q3LI77	160 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	PCOTH	Q58A44	107 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	TMEM128	Q5BJH2	165 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	ENHO	Q6UWT2	76 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	PATE2	Q6UY27	113 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	SOSTDC1	Q6X4U4	206 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	COA5	Q86WW8	74 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	NMES1	Q9C002	83 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	LPA	P08519	4548 aa		1.71	□□□□□ -2.14
SNHG1-222	ENST00000545308	TRBV6-8	A0A0A6YYG3	113 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	FAM25A	B3EWG3	89 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	FAM25C	B3EWG5	89 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	FAM25G	B3EWG6	89 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308		H3BQ15	152 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	TRGC2	P03986	189 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	BAALC-AS2	P0C853	105 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	FAU	P35544	74 aa	Known RBP	1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	TMBIM6	P55061	237 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	SNX29P2	Q8IUI4	249 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	OR2T35	Q8NGX2	323 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	COMMD3	Q9UBI1	195 aa		1.7	□□□□□ -2.14
SNHG1-222	ENST00000545308	TRBV25-1	A0A075B6N4	114 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308		M0R3E3	92 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	CST7	O76096	145 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	S100A11	P31949	105 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	KRTAP12-3	P60328	96 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	RRAS2	P62070	204 aa	Predicted RBP	1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	TMEM254	Q8TBM7	123 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	PLEKHB2	Q96CS7	222 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	C14orf132	Q9NPU4	83 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	LAMTOR2	Q9Y2Q5	125 aa		1.69	□□□□□ -2.14
SNHG1-222	ENST00000545308	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	1.68	□□□□□ -2.14
SNHG1-222	ENST00000545308	LOC107984640	A0A0U1RRK4	108 aa		1.68	□□□□□ -2.14

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms