RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 C18orf32Q8TCD1 76 aa8.14□□□□□ -1.11
DDX11-228ENST00000545115 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
DDX11-228ENST00000545115 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
DDX11-228ENST00000545115 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
DDX11-228ENST00000545115 RHEBQ15382 184 aa8.13□□□□□ -1.11
DDX11-228ENST00000545115 C3orf22Q8N5N4 141 aa8.13□□□□□ -1.11
DDX11-228ENST00000545115 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
DDX11-228ENST00000545115 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
DDX11-228ENST00000545115 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
DDX11-228ENST00000545115 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
DDX11-228ENST00000545115 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
DDX11-228ENST00000545115 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
DDX11-228ENST00000545115 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
DDX11-228ENST00000545115 LINC00158P58513 81 aa8.1□□□□□ -1.11
DDX11-228ENST00000545115 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
DDX11-228ENST00000545115 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
DDX11-228ENST00000545115 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
DDX11-228ENST00000545115 C10orf91Q5T1B1 145 aa8.09□□□□□ -1.11
DDX11-228ENST00000545115 SPRR4Q96PI1 79 aa8.09□□□□□ -1.11
DDX11-228ENST00000545115 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
DDX11-228ENST00000545115 CHTOPQ9Y3Y2 248 aaKnown RBP8.08□□□□□ -1.12
DDX11-228ENST00000545115 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
DDX11-228ENST00000545115 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
DDX11-228ENST00000545115 PRYO14603 147 aa8.06□□□□□ -1.12
DDX11-228ENST00000545115 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
DDX11-228ENST00000545115 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
DDX11-228ENST00000545115 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
DDX11-228ENST00000545115 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
DDX11-228ENST00000545115 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
DDX11-228ENST00000545115 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
DDX11-228ENST00000545115 BOD1L2Q8IYS8 172 aa8.04□□□□□ -1.12
DDX11-228ENST00000545115 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
DDX11-228ENST00000545115 SPRR1AP35321 89 aa8.03□□□□□ -1.12
DDX11-228ENST00000545115 KCNQ1DNQ9H478 68 aa8.03□□□□□ -1.12
DDX11-228ENST00000545115 NCR3O14931 201 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 HERV-K104P63124 156 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 NDUFA5Q16718 116 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 DAND5Q8N907 189 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 Q8NBF4 154 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
DDX11-228ENST00000545115 ETDCA0A1B0GVM5 59 aa8.01□□□□□ -1.13
DDX11-228ENST00000545115 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
DDX11-228ENST00000545115 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
DDX11-228ENST00000545115 LINC00587B1AMM8 73 aa8□□□□□ -1.13
DDX11-228ENST00000545115 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
DDX11-228ENST00000545115 SPINK1P00995 79 aa8□□□□□ -1.13
DDX11-228ENST00000545115 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
DDX11-228ENST00000545115 TRBV10-3A0A0K0K1G6 114 aa7.99□□□□□ -1.13
DDX11-228ENST00000545115 S100A12P80511 92 aa7.99□□□□□ -1.13
DDX11-228ENST00000545115 NDUFA12Q9UI09 145 aa7.99□□□□□ -1.13
DDX11-228ENST00000545115 SNAPINO95295 136 aa7.98□□□□□ -1.13
DDX11-228ENST00000545115 APOC3P02656 99 aa7.98□□□□□ -1.13
DDX11-228ENST00000545115 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
DDX11-228ENST00000545115 MAP1LC3CQ9BXW4 147 aa7.98□□□□□ -1.13
DDX11-228ENST00000545115 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
DDX11-228ENST00000545115 S100A1P23297 94 aa7.96□□□□□ -1.14
DDX11-228ENST00000545115 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
DDX11-228ENST00000545115 GAGE2AQ6NT46 116 aa7.96□□□□□ -1.14
DDX11-228ENST00000545115 SVBPQ8N300 66 aa7.96□□□□□ -1.14
DDX11-228ENST00000545115 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
DDX11-228ENST00000545115 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 B5MCH6 92 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 HSBP1O75506 76 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 MOBPQ13875 183 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
DDX11-228ENST00000545115 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
DDX11-228ENST00000545115 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
DDX11-228ENST00000545115 DDTP30046 118 aa7.93□□□□□ -1.14
DDX11-228ENST00000545115 SSBP3-AS1Q7Z2R9 100 aa7.93□□□□□ -1.14
DDX11-228ENST00000545115 YPEL4Q96NS1 127 aa7.93□□□□□ -1.14
DDX11-228ENST00000545115 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
DDX11-228ENST00000545115 H0Y8G0 127 aa7.92□□□□□ -1.14
DDX11-228ENST00000545115 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
DDX11-228ENST00000545115 TSPEAR-AS2P59090 65 aa7.92□□□□□ -1.14
DDX11-228ENST00000545115 Q6ZRX8 168 aa7.92□□□□□ -1.14
DDX11-228ENST00000545115 LEPROTO15243 131 aa7.91□□□□□ -1.14
DDX11-228ENST00000545115 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
DDX11-228ENST00000545115 Q8N377 158 aa7.91□□□□□ -1.14
DDX11-228ENST00000545115 Q9BRP9 147 aa7.91□□□□□ -1.14
DDX11-228ENST00000545115 SPANXB1Q9NS25 103 aaPredicted RBP7.91□□□□□ -1.14
DDX11-228ENST00000545115 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
DDX11-228ENST00000545115 SLC25A20O43772 301 aa7.89□□□□□ -1.15
DDX11-228ENST00000545115 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
DDX11-228ENST00000545115 PLNP26678 52 aa7.89□□□□□ -1.15
DDX11-228ENST00000545115 LINC01547P58512 204 aaPredicted RBP7.89□□□□□ -1.15
DDX11-228ENST00000545115 J3QQQ9 107 aa7.88□□□□□ -1.15
DDX11-228ENST00000545115 NMUP48645 174 aa7.88□□□□□ -1.15
DDX11-228ENST00000545115 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
DDX11-228ENST00000545115 NDUFC2O95298 119 aa7.87□□□□□ -1.15
DDX11-228ENST00000545115 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
DDX11-228ENST00000545115 HERVK_113P61574 105 aa7.87□□□□□ -1.15
DDX11-228ENST00000545115 JOSD1Q15040 202 aaPredicted RBP7.87□□□□□ -1.15
DDX11-228ENST00000545115 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
DDX11-228ENST00000545115 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
DDX11-228ENST00000545115 LGALS3P17931 250 aaKnown RBP7.85□□□□□ -1.15
DDX11-228ENST00000545115 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
DDX11-228ENST00000545115 ZNF73O43830 326 aaPredicted RBP7.84□□□□□ -1.15
DDX11-228ENST00000545115 SERF1AO75920 110 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms