RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 A0A096LNI7 61 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 UBE2L6O14933 153 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 MT-ND6P03923 174 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 GNG4P50150 75 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 UBE2G1P62253 170 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 SPANXN1Q5VSR9 72 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 FMC1Q96HJ9 113 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 OSTCQ9NRP0 149 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 LPAP08519 4548 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 TRBV20OR9-2A0A075B6H5 130 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
CPSF7-222ENST00000544585 TMEM223A0PJW6 202 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 ESDP10768 282 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 CENPWQ5EE01 88 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 Q86TA4 180 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 FER1L6-AS1Q8NA97 138 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 SNHG12Q9BXW3 62 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 GNB1LQ9BYB4 327 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 C8orf17Q9NRJ1 99 aa3.62□□□□□ -1.83
CPSF7-222ENST00000544585 M0QY20 66 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 M0R143 59 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 RASL11AQ6T310 242 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 OR10AG1Q8NH19 301 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 SMIM12Q96EX1 92 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 V9GYV3 84 aa3.61□□□□□ -1.83
CPSF7-222ENST00000544585 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 SMIM27A0A1W2PRY6 76 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 LTAP01374 205 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 FAM231DQ6ZW35 169 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 BAGE3Q86Y29 109 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
CPSF7-222ENST00000544585 IGHV1-58A0A0C4DH39 117 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 IGKV3OR2-268A0A0C4DH90 116 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 LOC107984640A0A0U1RRK4 108 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 FGF6P10767 208 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 RNASE13Q5GAN3 156 aaKnown RBP3.59□□□□□ -1.83
CPSF7-222ENST00000544585 AMMECR1LQ6DCA0 310 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 MRAP2Q96G30 205 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 CARD19Q96LW7 228 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 NAT8BQ9UHF3 227 aa3.59□□□□□ -1.83
CPSF7-222ENST00000544585 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 TMEM136Q6ZRR5 245 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 ATP5L2Q7Z4Y8 100 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 ORAOV1Q8WV07 137 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
CPSF7-222ENST00000544585 MUC21A0A140T8X8 626 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 NUPR1O60356 82 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 NCR2O95944 276 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 MGPP08493 103 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 UBE2D1P51668 147 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 RPS20P60866 119 aaKnown RBP3.57□□□□□ -1.84
CPSF7-222ENST00000544585 C9orf116Q5BN46 136 aaPredicted RBP3.57□□□□□ -1.84
CPSF7-222ENST00000544585 OR5A1Q8NGJ0 315 aa3.57□□□□□ -1.84
CPSF7-222ENST00000544585 RNASE7Q9H1E1 156 aaKnown RBP3.57□□□□□ -1.84
CPSF7-222ENST00000544585 LOC389332A0A1B0GUA5 103 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 C20orf202A1L168 122 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 A8MWL6 223 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 F2Z2F3 143 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 KRTDAPP60985 99 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 SS18Q15532 418 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 PMCHL1Q16048 86 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 VPS25Q9BRG1 176 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
CPSF7-222ENST00000544585 A0A1B0GV72 72 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 A0A1B0GXF2 115 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 CCL25O15444 150 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 NTF3P20783 257 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 XCL1P47992 114 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 MRPL54Q6P161 138 aaKnown RBP3.55□□□□□ -1.84
CPSF7-222ENST00000544585 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
CPSF7-222ENST00000544585 ORMDL3Q8N138 153 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 NUP35Q8NFH5 326 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 UQCR10Q9UDW1 63 aa3.55□□□□□ -1.84
CPSF7-222ENST00000544585 A8MU10 97 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 APOMO95445 188 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 IGLC6P0CF74 106 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 HBBP68871 147 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 COL5A1-AS1Q5SY13 56 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 C18orf32Q8TCD1 76 aa3.54□□□□□ -1.84
CPSF7-222ENST00000544585 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
CPSF7-222ENST00000544585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
CPSF7-222ENST00000544585 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
CPSF7-222ENST00000544585 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
CPSF7-222ENST00000544585 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
CPSF7-222ENST00000544585 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms