RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
TCF4-209ENST00000544241 HIGD2AQ9BW72 106 aa7.02□□□□□ -1.29
TCF4-209ENST00000544241 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
TCF4-209ENST00000544241 GYPEP15421 78 aa7.01□□□□□ -1.29
TCF4-209ENST00000544241 ELOF1P60002 83 aaKnown RBP7.01□□□□□ -1.29
TCF4-209ENST00000544241 DAD1P61803 113 aa7.01□□□□□ -1.29
TCF4-209ENST00000544241 CLPSL2Q6UWE3 100 aa7.01□□□□□ -1.29
TCF4-209ENST00000544241 Q8NDZ9 215 aa7□□□□□ -1.29
TCF4-209ENST00000544241 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 C19orf84I3L1E1 186 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 CD164Q04900 197 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 REG3AQ06141 175 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
TCF4-209ENST00000544241 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
TCF4-209ENST00000544241 UTP20O75691 2785 aaKnown RBP6.98□□□□□ -1.29
TCF4-209ENST00000544241 LCE6AA0A183 80 aa6.98□□□□□ -1.29
TCF4-209ENST00000544241 ANGP03950 147 aaKnown RBP6.98□□□□□ -1.29
TCF4-209ENST00000544241 GIG44P09565 113 aaPredicted RBP6.98□□□□□ -1.29
TCF4-209ENST00000544241 Q8N9L7 120 aa6.98□□□□□ -1.29
TCF4-209ENST00000544241 LINC01006Q8NI28 216 aa6.98□□□□□ -1.29
TCF4-209ENST00000544241 PRO0255Q9UI72 69 aa6.98□□□□□ -1.29
TCF4-209ENST00000544241 UBR5O95071 2799 aaPredicted RBP6.97□□□□□ -1.29
TCF4-209ENST00000544241 NDUFB1O75438 58 aa6.97□□□□□ -1.29
TCF4-209ENST00000544241 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
TCF4-209ENST00000544241 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
TCF4-209ENST00000544241 C2CD3Q4AC94 2353 aa6.97□□□□□ -1.29
TCF4-209ENST00000544241 Q6ZRP5 223 aa6.97□□□□□ -1.29
TCF4-209ENST00000544241 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
TCF4-209ENST00000544241 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 CRYBG3Q68DQ2 2970 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 CSNK1G2-AS1Q8NCQ2 148 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 ESM1Q9NQ30 184 aa6.96□□□□□ -1.3
TCF4-209ENST00000544241 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
TCF4-209ENST00000544241 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
TCF4-209ENST00000544241 CENPEQ02224 2701 aa6.94□□□□□ -1.3
TCF4-209ENST00000544241 FASNP49327 2511 aaKnown RBP6.94□□□□□ -1.3
TCF4-209ENST00000544241 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
TCF4-209ENST00000544241 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
TCF4-209ENST00000544241 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 FSHBP01225 129 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 SMIM29Q86T20 159 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 USP9YO00507 2555 aaPredicted RBP6.93□□□□□ -1.3
TCF4-209ENST00000544241 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 ETDCA0A1B0GVM5 59 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 M0R378 163 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
TCF4-209ENST00000544241 SPG11Q96JI7 2443 aa6.92□□□□□ -1.3
TCF4-209ENST00000544241 UBE2BP63146 152 aa6.92□□□□□ -1.3
TCF4-209ENST00000544241 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
TCF4-209ENST00000544241 CSPG4Q6UVK1 2322 aa6.92□□□□□ -1.3
TCF4-209ENST00000544241 PSPHP1O15172 72 aa6.92□□□□□ -1.3
TCF4-209ENST00000544241 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
TCF4-209ENST00000544241 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
TCF4-209ENST00000544241 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
TCF4-209ENST00000544241 LRCOL1A6NCL2 159 aa6.9□□□□□ -1.31
TCF4-209ENST00000544241 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.31
TCF4-209ENST00000544241 CELSR2Q9HCU4 2923 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 IGLV5-48A0A075B6I7 105 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 A0A096LPF7 62 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 PSCAO43653 123 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 XAGE1AQ9HD64 81 aa6.89□□□□□ -1.31
TCF4-209ENST00000544241 GCN1Q92616 2671 aaKnown RBP6.88□□□□□ -1.31
TCF4-209ENST00000544241 UBE2AP49459 152 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
TCF4-209ENST00000544241 PTPN13Q12923 2485 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 VPREB1P12018 145 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 LIMD2Q9BT23 127 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
TCF4-209ENST00000544241 WNK1Q9H4A3 2382 aa6.87□□□□□ -1.31
TCF4-209ENST00000544241 MAP1AP78559 2803 aaPredicted RBP6.87□□□□□ -1.31
TCF4-209ENST00000544241 IGLV1-51P01701 117 aa6.87□□□□□ -1.31
TCF4-209ENST00000544241 WFDC10AQ9H1F0 79 aa6.87□□□□□ -1.31
TCF4-209ENST00000544241 EGFEM1PQ0D2K5 195 aa6.86□□□□□ -1.31
TCF4-209ENST00000544241 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
TCF4-209ENST00000544241 ABCA12Q86UK0 2595 aa6.86□□□□□ -1.31
TCF4-209ENST00000544241 POLQO75417 2590 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
TCF4-209ENST00000544241 MP68P56378 58 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 NOTCH3Q9UM47 2321 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 NBPF19A0A087WUL8 3843 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 FBN2P35556 2912 aa6.85□□□□□ -1.31
TCF4-209ENST00000544241 LELP1Q5T871 98 aa6.84□□□□□ -1.31
TCF4-209ENST00000544241 J3QKU1 62 aa6.84□□□□□ -1.31
TCF4-209ENST00000544241 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
TCF4-209ENST00000544241 RETNQ9HD89 108 aa6.84□□□□□ -1.31
TCF4-209ENST00000544241 A8MUN3 132 aa6.83□□□□□ -1.32
TCF4-209ENST00000544241 DHRS4-AS1Q9P1J3 65 aa6.83□□□□□ -1.32
TCF4-209ENST00000544241 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
TCF4-209ENST00000544241 NDUFS5O43920 106 aa6.83□□□□□ -1.32
TCF4-209ENST00000544241 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms