RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 TRGC2P03986 189 aa8.58□□□□□ -1.04
VPS37B-204ENST00000543590 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
VPS37B-204ENST00000543590 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
VPS37B-204ENST00000543590 IGLV1-50A0A075B6I6 118 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 BCE1O60756 84 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 COX17Q14061 63 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 COA6Q5JTJ3 125 aaKnown RBP8.57□□□□□ -1.04
VPS37B-204ENST00000543590 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 HSBP1O75506 76 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
VPS37B-204ENST00000543590 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
VPS37B-204ENST00000543590 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
VPS37B-204ENST00000543590 S100A2P29034 98 aa8.55□□□□□ -1.04
VPS37B-204ENST00000543590 VPREB1P12018 145 aa8.54□□□□□ -1.04
VPS37B-204ENST00000543590 HIST3H2BBQ8N257 126 aa8.54□□□□□ -1.04
VPS37B-204ENST00000543590 IGKV2-28A0A075B6P5 120 aa8.52□□□□□ -1.05
VPS37B-204ENST00000543590 SERF1AO75920 110 aa8.52□□□□□ -1.05
VPS37B-204ENST00000543590 IGKV2D-28P01615 120 aa8.52□□□□□ -1.05
VPS37B-204ENST00000543590 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
VPS37B-204ENST00000543590 LINC00310P59036 64 aa8.52□□□□□ -1.05
VPS37B-204ENST00000543590 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
VPS37B-204ENST00000543590 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
VPS37B-204ENST00000543590 PCP4L1A6NKN8 68 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 LINC00158P58513 81 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 Q8NDZ9 215 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 H0Y8G0 127 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 CTAG1AP78358 180 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
VPS37B-204ENST00000543590 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
VPS37B-204ENST00000543590 UBE2AP49459 152 aa8.5□□□□□ -1.05
VPS37B-204ENST00000543590 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
VPS37B-204ENST00000543590 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
VPS37B-204ENST00000543590 TMEM238C9JI98 176 aa8.47□□□□□ -1.05
VPS37B-204ENST00000543590 SMIM13P0DJ93 91 aa8.47□□□□□ -1.05
VPS37B-204ENST00000543590 FABP4P15090 132 aa8.47□□□□□ -1.05
VPS37B-204ENST00000543590 HERV-K104P63124 156 aa8.47□□□□□ -1.05
VPS37B-204ENST00000543590 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
VPS37B-204ENST00000543590 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.05
VPS37B-204ENST00000543590 A0A087X002 238 aa8.46□□□□□ -1.05
VPS37B-204ENST00000543590 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.05
VPS37B-204ENST00000543590 NDUFA12Q9UI09 145 aa8.46□□□□□ -1.05
VPS37B-204ENST00000543590 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.05
VPS37B-204ENST00000543590 M0R378 163 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 CRYGAP11844 174 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 PRLHP81277 87 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
VPS37B-204ENST00000543590 PLNP26678 52 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
VPS37B-204ENST00000543590 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
VPS37B-204ENST00000543590 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
VPS37B-204ENST00000543590 LEPROTO15243 131 aa8.44□□□□□ -1.06
VPS37B-204ENST00000543590 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
VPS37B-204ENST00000543590 DPM2O94777 84 aa8.43□□□□□ -1.06
VPS37B-204ENST00000543590 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
VPS37B-204ENST00000543590 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
VPS37B-204ENST00000543590 PMCHL2Q9BQD1 86 aa8.43□□□□□ -1.06
VPS37B-204ENST00000543590 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
VPS37B-204ENST00000543590 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
VPS37B-204ENST00000543590 LRP2P98164 4655 aa8.41□□□□□ -1.06
VPS37B-204ENST00000543590 J3QQQ9 107 aa8.4□□□□□ -1.06
VPS37B-204ENST00000543590 IGKCP01834 107 aa8.4□□□□□ -1.06
VPS37B-204ENST00000543590 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
VPS37B-204ENST00000543590 NCR3O14931 201 aa8.39□□□□□ -1.07
VPS37B-204ENST00000543590 TSPAN13O95857 204 aa8.39□□□□□ -1.07
VPS37B-204ENST00000543590 HERVK_113P61574 105 aa8.39□□□□□ -1.07
VPS37B-204ENST00000543590 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
VPS37B-204ENST00000543590 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
VPS37B-204ENST00000543590 DAND5Q8N907 189 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 HIGD2AQ9BW72 106 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
VPS37B-204ENST00000543590 LOC107984156A0A0G2JMH3 177 aa8.37□□□□□ -1.07
VPS37B-204ENST00000543590 PRYO14603 147 aa8.37□□□□□ -1.07
VPS37B-204ENST00000543590 NMUP48645 174 aa8.37□□□□□ -1.07
VPS37B-204ENST00000543590 PRR4Q16378 134 aa8.37□□□□□ -1.07
VPS37B-204ENST00000543590 ARL17AQ8IVW1 177 aa8.37□□□□□ -1.07
VPS37B-204ENST00000543590 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
VPS37B-204ENST00000543590 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
VPS37B-204ENST00000543590 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
VPS37B-204ENST00000543590 SPRR1AP35321 89 aa8.35□□□□□ -1.07
VPS37B-204ENST00000543590 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
VPS37B-204ENST00000543590 E9PLD3 99 aa8.33□□□□□ -1.08
VPS37B-204ENST00000543590 DDTP30046 118 aa8.33□□□□□ -1.08
VPS37B-204ENST00000543590 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
VPS37B-204ENST00000543590 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
VPS37B-204ENST00000543590 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
VPS37B-204ENST00000543590 ETDCA0A1B0GVM5 59 aa8.32□□□□□ -1.08
VPS37B-204ENST00000543590 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
VPS37B-204ENST00000543590 MIEN1Q9BRT3 115 aa8.32□□□□□ -1.08
VPS37B-204ENST00000543590 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
VPS37B-204ENST00000543590 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
VPS37B-204ENST00000543590 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
VPS37B-204ENST00000543590 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
VPS37B-204ENST00000543590 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms