RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 A0A0G2JND7 137 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 C7orf77A4D0Y5 90 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 TMEM262E9PQX1 116 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 H0Y9P7 68 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 K7EP13 123 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 ARHGEF5Q12774 1597 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 CGREF1Q99674 301 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 PSENENQ9NZ42 101 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 DYNC1H1Q14204 4646 aaKnown RBP-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 PKD1P98161 4303 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 ANK3Q12955 4377 aaKnown RBP-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 AKAP9Q99996 3911 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 ANKRD36A6QL64 1941 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 ITPR1Q14643 2758 aa-0.68□□□□□ -2.52
KNTC1-213ENST00000542727 PKD1L2Q7Z442 2459 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 SLIT1O75093 1534 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 NUP188Q5SRE5 1749 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 XRN1Q8IZH2 1706 aaKnown RBP-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 CLIP1P30622 1438 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 EDC4Q6P2E9 1401 aaKnown RBP-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 ARMS2P0C7Q2 107 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 S100A12P80511 92 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 HIGD1BQ9P298 99 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 IER3IP1Q9Y5U9 82 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 PDCD11Q14690 1871 aaKnown RBP-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 VPS13DQ5THJ4 4388 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 CEP295Q9C0D2 2601 aa-0.69□□□□□ -2.52
KNTC1-213ENST00000542727 ROCK2O75116 1388 aaKnown RBP-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 DIP2CQ9Y2E4 1556 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 DNAH3Q8TD57 4116 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 SACSQ9NZJ4 4579 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 H3BQ15 152 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 GNG4P50150 75 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 PSMG4Q5JS54 123 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 WFDC13Q8IUB5 93 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 DEFB107AQ8IZN7 70 aa-0.7□□□□□ -2.52
KNTC1-213ENST00000542727 APOBP04114 4563 aaKnown RBP-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 MRC2Q9UBG0 1479 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 TRBV7-7A0A0K0K1E9 115 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 H3BNG1 76 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 PPP3R1P63098 170 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 SPRR2FQ96RM1 72 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 AP4S1Q9Y587 144 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 DNAH5Q8TE73 4624 aa-0.71□□□□□ -2.52
KNTC1-213ENST00000542727 CUL7Q14999 1698 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 PAPPA2Q9BXP8 1791 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 ACACAQ13085 2346 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 HMGN1P05114 100 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 HSD52Q0P140 79 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 PMCHL1Q16048 86 aa-0.72□□□□□ -2.52
KNTC1-213ENST00000542727 SRCAPQ6ZRS2 3230 aa-0.72□□□□□ -2.53
KNTC1-213ENST00000542727 MYOM2P54296 1465 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 DNAH9Q9NYC9 4486 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 TOP2BQ02880 1626 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 A0A0C4DFX4 3053 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 NDUFC1O43677 76 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 KRTAP19-6Q3LI70 58 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 NMSQ5H8A3 153 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 RPL13AP3Q6NVV1 102 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 QRICH2Q9H0J4 1663 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 CUBNO60494 3623 aa-0.73□□□□□ -2.53
KNTC1-213ENST00000542727 NBASA2RRP1 2371 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 ARHGAP5Q13017 1502 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 SPG11Q96JI7 2443 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 ADAMTS12P58397 1594 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 PTPN23Q9H3S7 1636 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 TMEM218A2RU14 115 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 MT1HL1P0DM35 61 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 S100A1P23297 94 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 GTF2H5Q6ZYL4 71 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 CACFD1Q9UGQ2 172 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 ABCC5O15440 1437 aa-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 TROQ12816 1431 aaPredicted RBP-0.74□□□□□ -2.53
KNTC1-213ENST00000542727 LRRC37AA6NMS7 1700 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 MARF1Q9Y4F3 1742 aaKnown RBP-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 REV3LO60673 3130 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 TRBV25-1A0A075B6N4 114 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 MT1AP04731 61 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 UQCRHP07919 91 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 ASIPP42127 132 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 MRPS10P82664 201 aaKnown RBP-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 NCOA3Q9Y6Q9 1424 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 MAPKBP1O60336 1514 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 CFAP46Q8IYW2 2715 aa-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 COL14A1Q05707 1796 aaKnown RBP-0.75□□□□□ -2.53
KNTC1-213ENST00000542727 TRANK1O15050 2925 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 hADV29S1A0JD25 119 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 C9orf92A6NGG3 77 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 CORTO00230 105 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 RPL38P63173 70 aaKnown RBP-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 DEFA5Q01523 94 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 LELP1Q5T871 98 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 FAM186AA6NE01 2351 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 KALRNO60229 2985 aa-0.76□□□□□ -2.53
KNTC1-213ENST00000542727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.77□□□□□ -2.53
KNTC1-213ENST00000542727 ANKRD50Q9ULJ7 1429 aa-0.77□□□□□ -2.53
KNTC1-213ENST00000542727 MPC2O95563 127 aa-0.77□□□□□ -2.53
KNTC1-213ENST00000542727 MT1HP80294 61 aa-0.77□□□□□ -2.53
KNTC1-213ENST00000542727 LYSTQ99698 3801 aa-0.77□□□□□ -2.53
KNTC1-213ENST00000542727 CICQ96RK0 1608 aaPredicted RBP-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms