RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
SCNN1A-217ENST00000542260 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
SCNN1A-217ENST00000542260 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
SCNN1A-217ENST00000542260 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
SCNN1A-217ENST00000542260 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
SCNN1A-217ENST00000542260 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
SCNN1A-217ENST00000542260 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
SCNN1A-217ENST00000542260 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
SCNN1A-217ENST00000542260 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
SCNN1A-217ENST00000542260 DPM2O94777 84 aa9.19□□□□□ -0.94
SCNN1A-217ENST00000542260 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
SCNN1A-217ENST00000542260 BCE1O60756 84 aa9.18□□□□□ -0.94
SCNN1A-217ENST00000542260 IGKCP01834 107 aa9.18□□□□□ -0.94
SCNN1A-217ENST00000542260 PLNP26678 52 aa9.18□□□□□ -0.94
SCNN1A-217ENST00000542260 PYY3Q5JQD4 70 aa9.18□□□□□ -0.94
SCNN1A-217ENST00000542260 TINCRA0A1B0GVN0 87 aa9.16□□□□□ -0.94
SCNN1A-217ENST00000542260 SMIM6P0DI80 62 aa9.16□□□□□ -0.94
SCNN1A-217ENST00000542260 IGLC3P0DOY3 106 aa9.16□□□□□ -0.94
SCNN1A-217ENST00000542260 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
SCNN1A-217ENST00000542260 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.94
SCNN1A-217ENST00000542260 CRYGAP11844 174 aa9.15□□□□□ -0.94
SCNN1A-217ENST00000542260 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
SCNN1A-217ENST00000542260 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
SCNN1A-217ENST00000542260 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
SCNN1A-217ENST00000542260 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
SCNN1A-217ENST00000542260 S100A12P80511 92 aa9.14□□□□□ -0.95
SCNN1A-217ENST00000542260 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
SCNN1A-217ENST00000542260 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
SCNN1A-217ENST00000542260 H3BRM9 83 aa9.13□□□□□ -0.95
SCNN1A-217ENST00000542260 TSPAN13O95857 204 aa9.13□□□□□ -0.95
SCNN1A-217ENST00000542260 HERVK_113P61574 105 aa9.13□□□□□ -0.95
SCNN1A-217ENST00000542260 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 A0A087X002 238 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
SCNN1A-217ENST00000542260 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
SCNN1A-217ENST00000542260 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
SCNN1A-217ENST00000542260 UBE2AP49459 152 aa9.1□□□□□ -0.95
SCNN1A-217ENST00000542260 GAGE10A6NGK3 116 aa9.09□□□□□ -0.95
SCNN1A-217ENST00000542260 C12orf57Q99622 126 aa9.09□□□□□ -0.95
SCNN1A-217ENST00000542260 MUC2Q02817 5179 aa9.09□□□□□ -0.95
SCNN1A-217ENST00000542260 SPINK8P0C7L1 97 aa9.08□□□□□ -0.96
SCNN1A-217ENST00000542260 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
SCNN1A-217ENST00000542260 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
SCNN1A-217ENST00000542260 SPATA45Q537H7 98 aa9.07□□□□□ -0.96
SCNN1A-217ENST00000542260 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
SCNN1A-217ENST00000542260 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
SCNN1A-217ENST00000542260 E9PLD3 99 aa9.05□□□□□ -0.96
SCNN1A-217ENST00000542260 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
SCNN1A-217ENST00000542260 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
SCNN1A-217ENST00000542260 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
SCNN1A-217ENST00000542260 LEPROTO15243 131 aa9.04□□□□□ -0.96
SCNN1A-217ENST00000542260 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
SCNN1A-217ENST00000542260 NMUP48645 174 aa9.04□□□□□ -0.96
SCNN1A-217ENST00000542260 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
SCNN1A-217ENST00000542260 PFN2P35080 140 aa9.03□□□□□ -0.96
SCNN1A-217ENST00000542260 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
SCNN1A-217ENST00000542260 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
SCNN1A-217ENST00000542260 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
SCNN1A-217ENST00000542260 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
SCNN1A-217ENST00000542260 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
SCNN1A-217ENST00000542260 COX17Q14061 63 aa9.01□□□□□ -0.97
SCNN1A-217ENST00000542260 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
SCNN1A-217ENST00000542260 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
SCNN1A-217ENST00000542260 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 J3QQQ9 107 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 CTAG1AP78358 180 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 PRLHP81277 87 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 FAM19A1Q7Z5A9 133 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 TMEM126AQ9H061 195 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 ERG28Q9UKR5 140 aa9□□□□□ -0.97
SCNN1A-217ENST00000542260 VPREB1P12018 145 aa8.99□□□□□ -0.97
SCNN1A-217ENST00000542260 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
SCNN1A-217ENST00000542260 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
SCNN1A-217ENST00000542260 COX8AP10176 69 aa8.98□□□□□ -0.97
SCNN1A-217ENST00000542260 C14orf144Q96I85 54 aa8.98□□□□□ -0.97
SCNN1A-217ENST00000542260 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
SCNN1A-217ENST00000542260 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
SCNN1A-217ENST00000542260 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
SCNN1A-217ENST00000542260 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 CDIP1Q9H305 208 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 UQCR10Q9UDW1 63 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
SCNN1A-217ENST00000542260 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
SCNN1A-217ENST00000542260 DLEU1O43261 78 aa8.95□□□□□ -0.98
SCNN1A-217ENST00000542260 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
SCNN1A-217ENST00000542260 M0R378 163 aa8.94□□□□□ -0.98
SCNN1A-217ENST00000542260 HERV-K104P63124 156 aa8.94□□□□□ -0.98
SCNN1A-217ENST00000542260 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
SCNN1A-217ENST00000542260 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
SCNN1A-217ENST00000542260 SCGB1D4Q6XE38 83 aa8.93□□□□□ -0.98
SCNN1A-217ENST00000542260 IGLV7-46A0A075B6I9 117 aa8.92□□□□□ -0.98
SCNN1A-217ENST00000542260 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
SCNN1A-217ENST00000542260 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms