RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 TRAV10A0A0B4J240 114 aa8.9□□□□□ -0.98
KDM3A-216ENST00000542128 H7BZZ5 65 aa8.9□□□□□ -0.98
KDM3A-216ENST00000542128 IGLV1-40P01703 118 aa8.9□□□□□ -0.98
KDM3A-216ENST00000542128 LINC00315P59091 139 aa8.9□□□□□ -0.98
KDM3A-216ENST00000542128 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.98
KDM3A-216ENST00000542128 CHD6Q8TD26 2715 aa8.89□□□□□ -0.99
KDM3A-216ENST00000542128 M0R2N4 97 aa8.89□□□□□ -0.99
KDM3A-216ENST00000542128 EIF4EBP3O60516 100 aaPredicted RBP8.89□□□□□ -0.99
KDM3A-216ENST00000542128 NDUFS5O43920 106 aa8.88□□□□□ -0.99
KDM3A-216ENST00000542128 TM2D3Q9BRN9 247 aa8.88□□□□□ -0.99
KDM3A-216ENST00000542128 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
KDM3A-216ENST00000542128 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
KDM3A-216ENST00000542128 CXCL6P80162 114 aa8.87□□□□□ -0.99
KDM3A-216ENST00000542128 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
KDM3A-216ENST00000542128 KLKP1Q107X0 134 aa8.87□□□□□ -0.99
KDM3A-216ENST00000542128 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
KDM3A-216ENST00000542128 LINC00269Q8N2A0 174 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 PRM2P04554 102 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 C1orf158Q8N1D5 194 aa8.86□□□□□ -0.99
KDM3A-216ENST00000542128 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
KDM3A-216ENST00000542128 Q8N9L7 120 aa8.84□□□□□ -0.99
KDM3A-216ENST00000542128 A0A0J9YWU9 116 aa8.84□□□□□ -1
KDM3A-216ENST00000542128 KRTAP24-1Q3LI83 254 aa8.83□□□□□ -1
KDM3A-216ENST00000542128 C16orf95Q9H693 158 aa8.83□□□□□ -1
KDM3A-216ENST00000542128 IGKV2-24A0A0C4DH68 120 aa8.83□□□□□ -1
KDM3A-216ENST00000542128 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
KDM3A-216ENST00000542128 COL6A5A8TX70 2615 aa8.82□□□□□ -1
KDM3A-216ENST00000542128 IGLV1-51P01701 117 aa8.81□□□□□ -1
KDM3A-216ENST00000542128 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
KDM3A-216ENST00000542128 MUC7Q8TAX7 377 aa8.81□□□□□ -1
KDM3A-216ENST00000542128 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
KDM3A-216ENST00000542128 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
KDM3A-216ENST00000542128 XAGE1AQ9HD64 81 aa8.81□□□□□ -1
KDM3A-216ENST00000542128 IGSF10Q6WRI0 2623 aa8.8□□□□□ -1
KDM3A-216ENST00000542128 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
KDM3A-216ENST00000542128 OXTP01178 125 aa8.8□□□□□ -1
KDM3A-216ENST00000542128 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.8□□□□□ -1
KDM3A-216ENST00000542128 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
KDM3A-216ENST00000542128 LINC00208Q96KT6 92 aa8.79□□□□□ -1
KDM3A-216ENST00000542128 C14orf177Q52M58 125 aa8.79□□□□□ -1
KDM3A-216ENST00000542128 MUC4Q99102 2169 aa8.79□□□□□ -1
KDM3A-216ENST00000542128 PCSK5Q92824 1860 aa8.78□□□□□ -1
KDM3A-216ENST00000542128 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
KDM3A-216ENST00000542128 TEX15Q9BXT5 2789 aa8.78□□□□□ -1
KDM3A-216ENST00000542128 BEAN1Q3B7T3 259 aa8.78□□□□□ -1
KDM3A-216ENST00000542128 LIMD2Q9BT23 127 aa8.77□□□□□ -1
KDM3A-216ENST00000542128 RELNP78509 3460 aa8.77□□□□□ -1.01
KDM3A-216ENST00000542128 LINC00575Q6W349 94 aa8.77□□□□□ -1.01
KDM3A-216ENST00000542128 Q6ZSN1 163 aa8.77□□□□□ -1.01
KDM3A-216ENST00000542128 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
KDM3A-216ENST00000542128 A8MTW9 85 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 C11orf72Q8NBR9 251 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 A8MUN3 132 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
KDM3A-216ENST00000542128 Q8IZM0 81 aa8.75□□□□□ -1.01
KDM3A-216ENST00000542128 REG3AQ06141 175 aa8.75□□□□□ -1.01
KDM3A-216ENST00000542128 Q6ZQT0 140 aa8.75□□□□□ -1.01
KDM3A-216ENST00000542128 NUPR2A6NF83 97 aa8.74□□□□□ -1.01
KDM3A-216ENST00000542128 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
KDM3A-216ENST00000542128 C9orf129Q5T035 196 aaKnown RBP8.74□□□□□ -1.01
KDM3A-216ENST00000542128 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
KDM3A-216ENST00000542128 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 HCG22E2RYF7 251 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 COX17Q14061 63 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 FP248Q71RG6 208 aaPredicted RBP8.73□□□□□ -1.01
KDM3A-216ENST00000542128 KALRNO60229 2985 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 SERTAD4-AS1Q5TG53 156 aa8.73□□□□□ -1.01
KDM3A-216ENST00000542128 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
KDM3A-216ENST00000542128 LOC100131303A0A0U1RQF7 123 aa8.72□□□□□ -1.01
KDM3A-216ENST00000542128 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
KDM3A-216ENST00000542128 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
KDM3A-216ENST00000542128 B9D2Q9BPU9 175 aa8.72□□□□□ -1.01
KDM3A-216ENST00000542128 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
KDM3A-216ENST00000542128 PRR15Q8IV56 129 aa8.71□□□□□ -1.01
KDM3A-216ENST00000542128 Q9UF83 564 aa8.71□□□□□ -1.01
KDM3A-216ENST00000542128 H0Y9J4 135 aa8.71□□□□□ -1.01
KDM3A-216ENST00000542128 UNC79Q9P2D8 2635 aa8.71□□□□□ -1.02
KDM3A-216ENST00000542128 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
KDM3A-216ENST00000542128 KTN1-AS1Q86SY8 53 aa8.7□□□□□ -1.02
KDM3A-216ENST00000542128 NBEAL1Q6ZS30 2694 aa8.7□□□□□ -1.02
KDM3A-216ENST00000542128 Q6ZTC4 211 aa8.7□□□□□ -1.02
KDM3A-216ENST00000542128 GCN1Q92616 2671 aaKnown RBP8.7□□□□□ -1.02
KDM3A-216ENST00000542128 IGLV4-60A0A075B6I1 120 aa8.7□□□□□ -1.02
KDM3A-216ENST00000542128 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
KDM3A-216ENST00000542128 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
KDM3A-216ENST00000542128 LOC110117498A0A087WWA1 95 aa8.68□□□□□ -1.02
KDM3A-216ENST00000542128 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
KDM3A-216ENST00000542128 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
KDM3A-216ENST00000542128 FLNCQ14315 2725 aa8.67□□□□□ -1.02
KDM3A-216ENST00000542128 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
KDM3A-216ENST00000542128 VPREB1P12018 145 aa8.67□□□□□ -1.02
KDM3A-216ENST00000542128 LRBAP50851 2863 aa8.67□□□□□ -1.02
KDM3A-216ENST00000542128 TACC2O95359 2948 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms