RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 APOMO95445 188 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 IGHV3-33P01772 117 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 CRPP02741 224 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 PRSS2P07478 247 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 CFC1BP0CG36 223 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 CFC1P0CG37 223 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
LMO3-226ENST00000541589 NAA38Q9BRA0 125 aaKnown RBP5.48□□□□□ -1.53
LMO3-226ENST00000541589 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 FABP2P12104 132 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 FOXI1Q12951 378 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 Q6ZR54 194 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 PPDPFQ9H3Y8 114 aa5.47□□□□□ -1.53
LMO3-226ENST00000541589 K7EP34 96 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 MALP21145 153 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 CXCL5P42830 114 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 GTF2H5Q6ZYL4 71 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 LINC00308Q8TCZ7 52 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 UBE2WQ96B02 151 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 PRO1854Q9UHT4 67 aa5.46□□□□□ -1.53
LMO3-226ENST00000541589 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 C16orf90A8MZG2 172 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 IBA57-AS1B1ANH7 110 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 TSPAN13O95857 204 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 DAND5Q8N907 189 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 SPCS1Q9Y6A9 102 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 MYCBP2O75592 4640 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 A0A0U1RRA0 63 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 CCL18P55774 89 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 CKS1BP61024 79 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 NPC2P61916 151 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 KIAA0087Q14695 138 aa5.45□□□□□ -1.54
LMO3-226ENST00000541589 FAT1Q14517 4588 aa5.44□□□□□ -1.54
LMO3-226ENST00000541589 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
LMO3-226ENST00000541589 ERG28Q9UKR5 140 aa5.44□□□□□ -1.54
LMO3-226ENST00000541589 LINC00588Q9Y4M8 146 aa5.44□□□□□ -1.54
LMO3-226ENST00000541589 LINC00158P58513 81 aa5.43□□□□□ -1.54
LMO3-226ENST00000541589 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
LMO3-226ENST00000541589 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
LMO3-226ENST00000541589 MIR7-3HGQ8N6C7 128 aa5.43□□□□□ -1.54
LMO3-226ENST00000541589 UPK3BQ9BT76 320 aa5.43□□□□□ -1.54
LMO3-226ENST00000541589 KRTAP26-1Q6PEX3 210 aa5.42□□□□□ -1.54
LMO3-226ENST00000541589 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
LMO3-226ENST00000541589 C1orf43Q9BWL3 253 aa5.42□□□□□ -1.54
LMO3-226ENST00000541589 LOC107984156A0A0G2JMH3 177 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 PFN2P35080 140 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 COX17Q14061 63 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 Q1RN00 199 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 C1orf134Q5TEV5 83 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
LMO3-226ENST00000541589 PSMB2P49721 201 aa5.4□□□□□ -1.54
LMO3-226ENST00000541589 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
LMO3-226ENST00000541589 TRBV20-1A0A075B6N2 111 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
LMO3-226ENST00000541589 TRBV30A0A0K0K1B3 111 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 H7C2G1 150 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
LMO3-226ENST00000541589 NTN5Q8WTR8 489 aaPredicted RBP5.39□□□□□ -1.55
LMO3-226ENST00000541589 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 IGKV2D-24A0A075B6R9 120 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 EPM2AB3EWF7 344 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 SCGB1C2P0DMR2 95 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 C6orf223Q8N319 242 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 RMI2Q96E14 147 aa5.39□□□□□ -1.55
LMO3-226ENST00000541589 TRAV13-2A0A0B4J235 113 aa5.38□□□□□ -1.55
LMO3-226ENST00000541589 F8WDY8 70 aa5.38□□□□□ -1.55
LMO3-226ENST00000541589 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
LMO3-226ENST00000541589 C2orf48Q96LS8 159 aa5.38□□□□□ -1.55
LMO3-226ENST00000541589 Q9HAA7 133 aa5.38□□□□□ -1.55
LMO3-226ENST00000541589 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 H3BMG7 143 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 TRIAP1O43715 76 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 TCL1BO95988 128 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 COX6CP09669 75 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 LINC00526Q96FQ7 95 aa5.37□□□□□ -1.55
LMO3-226ENST00000541589 IGKV2-28A0A075B6P5 120 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 F8W1H4 67 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 NDUFC2O95298 119 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 IGKV2D-28P01615 120 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 HIGD2BQ4VC39 106 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
LMO3-226ENST00000541589 UBE2DNLQ8IWF7 75 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
LMO3-226ENST00000541589 ATXN8Q156A1 80 aa5.35□□□□□ -1.55
LMO3-226ENST00000541589 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
LMO3-226ENST00000541589 SRRM2Q9UQ35 2752 aaKnown RBP5.35□□□□□ -1.55
LMO3-226ENST00000541589 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
LMO3-226ENST00000541589 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.55
LMO3-226ENST00000541589 RPL28P46779 137 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms