RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
TTR-203ENST00000541025 LINC00614P0C842 121 aa3.93□□□□□ -1.78
TTR-203ENST00000541025 G0S2P27469 103 aa3.93□□□□□ -1.78
TTR-203ENST00000541025 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
TTR-203ENST00000541025 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
TTR-203ENST00000541025 CST9LQ9H4G1 147 aa3.93□□□□□ -1.78
TTR-203ENST00000541025 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
TTR-203ENST00000541025 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
TTR-203ENST00000541025 HERC1Q15751 4861 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 LOC107984640A0A0U1RRK4 108 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 A0A1W2PNN7 141 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 NDUFA1O15239 70 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 TRGC2P03986 189 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 HERVK_113P63121 156 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 RPL18AQ02543 176 aaKnown RBP3.92□□□□□ -1.78
TTR-203ENST00000541025 PDZD11Q5EBL8 140 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 LINC01561Q8N1V8 128 aa3.92□□□□□ -1.78
TTR-203ENST00000541025 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
TTR-203ENST00000541025 TINCRA0A1B0GVN0 87 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 COLCA2A8K830 154 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 SCO1O75880 301 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 HBDP02042 147 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 PMVKQ15126 192 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
TTR-203ENST00000541025 GEMIN7Q9H840 131 aaKnown RBP3.91□□□□□ -1.78
TTR-203ENST00000541025 TOMM7Q9P0U1 55 aa3.91□□□□□ -1.78
TTR-203ENST00000541025 FAM168BA1KXE4 195 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 LINC01549A6NIU2 74 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 SPINK8P0C7L1 97 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 TLX1NBP0CAT3 122 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 NDUFA6P56556 154 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 SEC11AP67812 179 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 Q8IZM0 81 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 LINC00474Q9P2X8 69 aa3.9□□□□□ -1.79
TTR-203ENST00000541025 TRBV30A0A0K0K1B3 111 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 NUPR1O60356 82 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 IGLC3P0DOY3 106 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
TTR-203ENST00000541025 RAB5BP61020 215 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 PRR3P79522 188 aaKnown RBP3.89□□□□□ -1.79
TTR-203ENST00000541025 FAM19A2Q8N3H0 131 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 CHCHD1Q96BP2 118 aaKnown RBP3.89□□□□□ -1.79
TTR-203ENST00000541025 PACRGQ96M98 296 aaPredicted RBP3.89□□□□□ -1.79
TTR-203ENST00000541025 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
TTR-203ENST00000541025 C11orf86A6NJI1 115 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 SERF1AO75920 110 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 ATP5LO75964 103 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 CKS1BP61024 79 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
TTR-203ENST00000541025 PHF5AQ7RTV0 110 aaKnown RBP3.88□□□□□ -1.79
TTR-203ENST00000541025 BAGE3Q86Y29 109 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 IFI27L1Q96BM0 104 aa3.88□□□□□ -1.79
TTR-203ENST00000541025 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
TTR-203ENST00000541025 A8MU10 97 aa3.87□□□□□ -1.79
TTR-203ENST00000541025 F8VRH5 84 aa3.87□□□□□ -1.79
TTR-203ENST00000541025 HSBP1O75506 76 aa3.87□□□□□ -1.79
TTR-203ENST00000541025 FAM19A5Q7Z5A7 132 aaPredicted RBP3.87□□□□□ -1.79
TTR-203ENST00000541025 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
TTR-203ENST00000541025 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
TTR-203ENST00000541025 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
TTR-203ENST00000541025 PSORS1C2Q9UIG4 136 aa3.86□□□□□ -1.79
TTR-203ENST00000541025 CHTOPQ9Y3Y2 248 aaKnown RBP3.86□□□□□ -1.79
TTR-203ENST00000541025 TRAV12-1A0A0B4J245 112 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 H0Y8G0 127 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 H3BRM9 83 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 CXCL5P42830 114 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 TMEM170BQ5T4T1 132 aa3.85□□□□□ -1.79
TTR-203ENST00000541025 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
TTR-203ENST00000541025 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 M0QXV9 152 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BKO60814 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 LEPROTL1O95214 131 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BJP06899 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 FABP4P15090 132 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BOP23527 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BBP33778 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BDP58876 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BCP62807 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST2H2BEQ16778 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BHQ93079 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BNQ99877 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 HIST1H2BMQ99879 126 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 PPDPFQ9H3Y8 114 aa3.84□□□□□ -1.79
TTR-203ENST00000541025 TNXBP22105 4242 aa3.83□□□□□ -1.8
TTR-203ENST00000541025 OXTP01178 125 aa3.83□□□□□ -1.8
TTR-203ENST00000541025 PFN2P35080 140 aa3.83□□□□□ -1.8
TTR-203ENST00000541025 C1orf137Q5JT78 98 aa3.83□□□□□ -1.8
TTR-203ENST00000541025 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
TTR-203ENST00000541025 ZNF625Q96I27 306 aaPredicted RBP3.83□□□□□ -1.8
TTR-203ENST00000541025 PMCHL2Q9BQD1 86 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms