RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 KLK12Q9UKR0 248 aa5.64□□□□□ -1.51
CHD4-208ENST00000540960 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
CHD4-208ENST00000540960 TRAV13-2A0A0B4J235 113 aa5.63□□□□□ -1.51
CHD4-208ENST00000540960 A4D1N5 150 aa5.63□□□□□ -1.51
CHD4-208ENST00000540960 K7EP34 96 aa5.63□□□□□ -1.51
CHD4-208ENST00000540960 DNAH10OSP0CZ25 163 aa5.63□□□□□ -1.51
CHD4-208ENST00000540960 LITAFQ99732 161 aa5.63□□□□□ -1.51
CHD4-208ENST00000540960 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 CFC1BP0CG36 223 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 CFC1P0CG37 223 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 FUSP35637 526 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD4-208ENST00000540960 LINC00158P58513 81 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 ESRGQ1W209 222 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 LINC00308Q8TCZ7 52 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 UPK3BQ9BT76 320 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 CBY1Q9Y3M2 126 aa5.62□□□□□ -1.51
CHD4-208ENST00000540960 PSMB2P49721 201 aa5.61□□□□□ -1.51
CHD4-208ENST00000540960 FOXI1Q12951 378 aa5.61□□□□□ -1.51
CHD4-208ENST00000540960 Q1RN00 199 aa5.61□□□□□ -1.51
CHD4-208ENST00000540960 GVQW2A0A096LPI5 108 aaPredicted RBP5.6□□□□□ -1.51
CHD4-208ENST00000540960 F8W1H4 67 aa5.6□□□□□ -1.51
CHD4-208ENST00000540960 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
CHD4-208ENST00000540960 IGHV3-33P01772 117 aa5.6□□□□□ -1.51
CHD4-208ENST00000540960 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
CHD4-208ENST00000540960 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 K7ERJ3 54 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 SNCGO76070 127 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 HAMPP81172 84 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 SPAG11BQ08648 103 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 ADAMTSL4-AS1Q5T5F5 129 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 ENHOQ6UWT2 76 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
CHD4-208ENST00000540960 IGLV10-54A0A075B6I4 117 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 NDUFC2O95298 119 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 TSPAN13O95857 204 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 WFDC10BQ8IUB3 73 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 MIR7-3HGQ8N6C7 128 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 MUC2Q02817 5179 aa5.58□□□□□ -1.52
CHD4-208ENST00000540960 J3QR89 54 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 KIAA0087Q14695 138 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 ATXN8Q156A1 80 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 TTC32Q5I0X7 151 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 UBE2DNLQ8IWF7 75 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
CHD4-208ENST00000540960 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
CHD4-208ENST00000540960 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
CHD4-208ENST00000540960 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 H0YGX0 51 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 M0QXV9 152 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 PFN2P35080 140 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
CHD4-208ENST00000540960 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 NTN5Q8WTR8 489 aaPredicted RBP5.55□□□□□ -1.52
CHD4-208ENST00000540960 LINC00588Q9Y4M8 146 aa5.55□□□□□ -1.52
CHD4-208ENST00000540960 A0A0U1RRA0 63 aa5.54□□□□□ -1.52
CHD4-208ENST00000540960 H7C2G1 150 aa5.54□□□□□ -1.52
CHD4-208ENST00000540960 K7ERU9 68 aa5.54□□□□□ -1.52
CHD4-208ENST00000540960 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
CHD4-208ENST00000540960 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
CHD4-208ENST00000540960 TRBV10-2A0A0K0K1G8 114 aa5.53□□□□□ -1.52
CHD4-208ENST00000540960 GHRHP01286 108 aa5.53□□□□□ -1.52
CHD4-208ENST00000540960 DAND5Q8N907 189 aa5.53□□□□□ -1.52
CHD4-208ENST00000540960 CARD19Q96LW7 228 aa5.53□□□□□ -1.52
CHD4-208ENST00000540960 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
CHD4-208ENST00000540960 H3BQ85 93 aa5.52□□□□□ -1.53
CHD4-208ENST00000540960 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
CHD4-208ENST00000540960 NPC2P61916 151 aa5.52□□□□□ -1.53
CHD4-208ENST00000540960 Q8N3U1 123 aa5.52□□□□□ -1.53
CHD4-208ENST00000540960 NAA38Q9BRA0 125 aaKnown RBP5.52□□□□□ -1.53
CHD4-208ENST00000540960 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
CHD4-208ENST00000540960 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 A0A1B0GX51 115 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 H3BMG7 143 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 TRACP01848 142 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 SYCNQ0VAF6 134 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 KRTAP26-1Q6PEX3 210 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 C2orf82Q6UX34 121 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 OR13C6PQ8NH95 151 aa5.51□□□□□ -1.53
CHD4-208ENST00000540960 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 NDUFC2-KCTD14E9PQ53 114 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 H3BT86 120 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 TRIAP1O43715 76 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 LINC01600Q96MT4 127 aa5.5□□□□□ -1.53
CHD4-208ENST00000540960 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
CHD4-208ENST00000540960 LST1O00453 97 aa5.49□□□□□ -1.53
CHD4-208ENST00000540960 TCL1BO95988 128 aa5.49□□□□□ -1.53
CHD4-208ENST00000540960 TLX1NBP0CAT3 122 aa5.49□□□□□ -1.53
CHD4-208ENST00000540960 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
CHD4-208ENST00000540960 Q9HAA7 133 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms