RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 HIVEP2P31629 2446 aa8.84□□□□□ -0.99
DNMT1-203ENST00000540357 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
DNMT1-203ENST00000540357 WIPF1O43516 503 aa8.84□□□□□ -0.99
DNMT1-203ENST00000540357 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
DNMT1-203ENST00000540357 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
DNMT1-203ENST00000540357 LINC00208Q96KT6 92 aa8.82□□□□□ -1
DNMT1-203ENST00000540357 REG3GQ6UW15 175 aa8.82□□□□□ -1
DNMT1-203ENST00000540357 A0A096LNT2 108 aa8.8□□□□□ -1
DNMT1-203ENST00000540357 TRBV7-4A0A0J9YYF1 115 aa8.8□□□□□ -1
DNMT1-203ENST00000540357 hDV103S1A0JD37 113 aa8.8□□□□□ -1
DNMT1-203ENST00000540357 PSPHP1O15172 72 aa8.8□□□□□ -1
DNMT1-203ENST00000540357 A6NED7 52 aa8.79□□□□□ -1
DNMT1-203ENST00000540357 C7orf33Q8WU49 177 aa8.79□□□□□ -1
DNMT1-203ENST00000540357 CFAP54Q96N23 3096 aa8.79□□□□□ -1
DNMT1-203ENST00000540357 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
DNMT1-203ENST00000540357 USP9XQ93008 2570 aaPredicted RBP8.79□□□□□ -1
DNMT1-203ENST00000540357 VPREB1P12018 145 aa8.78□□□□□ -1
DNMT1-203ENST00000540357 IGKV4-1P06312 121 aa8.78□□□□□ -1
DNMT1-203ENST00000540357 EPG5Q9HCE0 2579 aa8.78□□□□□ -1
DNMT1-203ENST00000540357 INAFM1C9JVW0 142 aa8.77□□□□□ -1.01
DNMT1-203ENST00000540357 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
DNMT1-203ENST00000540357 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
DNMT1-203ENST00000540357 LINC00336Q6ZUF6 198 aa8.77□□□□□ -1.01
DNMT1-203ENST00000540357 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 Q6ZTC4 211 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 Q8NBF4 154 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 C19orf73Q9NVV2 129 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 H3BNG1 76 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
DNMT1-203ENST00000540357 USP9YO00507 2555 aaPredicted RBP8.76□□□□□ -1.01
DNMT1-203ENST00000540357 DOPEY1Q5JWR5 2465 aa8.75□□□□□ -1.01
DNMT1-203ENST00000540357 A0A096LNI7 61 aa8.75□□□□□ -1.01
DNMT1-203ENST00000540357 H0Y9P7 68 aa8.75□□□□□ -1.01
DNMT1-203ENST00000540357 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
DNMT1-203ENST00000540357 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
DNMT1-203ENST00000540357 A0A087WSZ3 146 aa8.74□□□□□ -1.01
DNMT1-203ENST00000540357 Q6ZRX8 168 aa8.74□□□□□ -1.01
DNMT1-203ENST00000540357 CCDC168Q8NDH2 2452 aa8.74□□□□□ -1.01
DNMT1-203ENST00000540357 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
DNMT1-203ENST00000540357 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
DNMT1-203ENST00000540357 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
DNMT1-203ENST00000540357 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
DNMT1-203ENST00000540357 Q8NAQ8 132 aa8.72□□□□□ -1.01
DNMT1-203ENST00000540357 Q9BRP9 147 aa8.72□□□□□ -1.01
DNMT1-203ENST00000540357 RETNQ9HD89 108 aa8.71□□□□□ -1.01
DNMT1-203ENST00000540357 LAMA1P25391 3075 aa8.7□□□□□ -1.02
DNMT1-203ENST00000540357 SEC61GP60059 68 aa8.7□□□□□ -1.02
DNMT1-203ENST00000540357 Q5XG85 94 aa8.7□□□□□ -1.02
DNMT1-203ENST00000540357 H3BPC8 53 aa8.7□□□□□ -1.02
DNMT1-203ENST00000540357 M0R2N4 97 aa8.7□□□□□ -1.02
DNMT1-203ENST00000540357 TRIOO75962 3097 aa8.69□□□□□ -1.02
DNMT1-203ENST00000540357 ZFYVE26Q68DK2 2539 aa8.69□□□□□ -1.02
DNMT1-203ENST00000540357 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
DNMT1-203ENST00000540357 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
DNMT1-203ENST00000540357 VCANP13611 3396 aa8.69□□□□□ -1.02
DNMT1-203ENST00000540357 FN1P02751 2386 aaKnown RBP8.68□□□□□ -1.02
DNMT1-203ENST00000540357 Q6ZRP5 223 aa8.68□□□□□ -1.02
DNMT1-203ENST00000540357 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.67□□□□□ -1.02
DNMT1-203ENST00000540357 ZNF462Q96JM2 2506 aa8.67□□□□□ -1.02
DNMT1-203ENST00000540357 XIRP2A4UGR9 3374 aa8.67□□□□□ -1.02
DNMT1-203ENST00000540357 SMR3AQ99954 134 aa8.67□□□□□ -1.02
DNMT1-203ENST00000540357 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
DNMT1-203ENST00000540357 C1orf64Q8NEQ6 169 aa8.66□□□□□ -1.02
DNMT1-203ENST00000540357 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
DNMT1-203ENST00000540357 SZT2Q5T011 3432 aa8.65□□□□□ -1.02
DNMT1-203ENST00000540357 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
DNMT1-203ENST00000540357 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
DNMT1-203ENST00000540357 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
DNMT1-203ENST00000540357 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
DNMT1-203ENST00000540357 K7EQZ3 153 aa8.62□□□□□ -1.03
DNMT1-203ENST00000540357 PRLHP81277 87 aa8.62□□□□□ -1.03
DNMT1-203ENST00000540357 Q8N377 158 aa8.62□□□□□ -1.03
DNMT1-203ENST00000540357 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
DNMT1-203ENST00000540357 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
DNMT1-203ENST00000540357 FLNBO75369 2602 aaKnown RBP8.6□□□□□ -1.03
DNMT1-203ENST00000540357 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
DNMT1-203ENST00000540357 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
DNMT1-203ENST00000540357 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
DNMT1-203ENST00000540357 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
DNMT1-203ENST00000540357 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
DNMT1-203ENST00000540357 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
DNMT1-203ENST00000540357 VPS13AQ96RL7 3174 aa8.59□□□□□ -1.03
DNMT1-203ENST00000540357 OXTP01178 125 aa8.58□□□□□ -1.04
DNMT1-203ENST00000540357 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
DNMT1-203ENST00000540357 ABCA2Q9BZC7 2435 aa8.58□□□□□ -1.04
DNMT1-203ENST00000540357 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-203ENST00000540357 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
DNMT1-203ENST00000540357 IGLV5-48A0A075B6I7 105 aa8.57□□□□□ -1.04
DNMT1-203ENST00000540357 NBEAQ8NFP9 2946 aa8.56□□□□□ -1.04
DNMT1-203ENST00000540357 IGHV6-1A0A0B4J1U7 121 aa8.55□□□□□ -1.04
DNMT1-203ENST00000540357 DSPP15924 2871 aaKnown RBP8.54□□□□□ -1.04
DNMT1-203ENST00000540357 POLQO75417 2590 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
DNMT1-203ENST00000540357 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 Q8NDZ9 215 aa8.54□□□□□ -1.04
DNMT1-203ENST00000540357 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms