RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LINC00337Q8N6G1 96 aa7.05□□□□□ -1.28
TRAF1-202ENST00000540010 MAST4O15021 2626 aa7.05□□□□□ -1.28
TRAF1-202ENST00000540010 H3BQ85 93 aa7.05□□□□□ -1.28
TRAF1-202ENST00000540010 ATP5EP2Q5VTU8 51 aa7.05□□□□□ -1.28
TRAF1-202ENST00000540010 A0A087WZ39 114 aa7.04□□□□□ -1.28
TRAF1-202ENST00000540010 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
TRAF1-202ENST00000540010 Q8IZM0 81 aa7.04□□□□□ -1.28
TRAF1-202ENST00000540010 PRR4Q16378 134 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 A0A0U1RQV1 116 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 M0QXV9 152 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
TRAF1-202ENST00000540010 HIVEP1P15822 2718 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 LOC107984640A0A0U1RRK4 108 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 Q8N814 137 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 Q6JHZ5 121 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 CSDC2Q9Y534 153 aaKnown RBP7.02□□□□□ -1.29
TRAF1-202ENST00000540010 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 FHL2Q14192 279 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
TRAF1-202ENST00000540010 H0Y9J4 135 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 UBE2AP49459 152 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 C19orf73Q9NVV2 129 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 ZNF73O43830 326 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-202ENST00000540010 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-202ENST00000540010 NSD1Q96L73 2696 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-202ENST00000540010 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 MIFP14174 115 aa7.01□□□□□ -1.29
TRAF1-202ENST00000540010 KPRPQ5T749 579 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-202ENST00000540010 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 NDUFB1O75438 58 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 NDUFC2O95298 119 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 C6orf223Q8N319 242 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 GIG44P09565 113 aaPredicted RBP7□□□□□ -1.29
TRAF1-202ENST00000540010 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 SOSTDC1Q6X4U4 206 aa7□□□□□ -1.29
TRAF1-202ENST00000540010 CELA1Q9UNI1 258 aa6.99□□□□□ -1.29
TRAF1-202ENST00000540010 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.99□□□□□ -1.29
TRAF1-202ENST00000540010 LELP1Q5T871 98 aa6.99□□□□□ -1.29
TRAF1-202ENST00000540010 WFDC10BQ8IUB3 73 aa6.98□□□□□ -1.29
TRAF1-202ENST00000540010 SPATA3Q8NHX4 192 aa6.98□□□□□ -1.29
TRAF1-202ENST00000540010 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
TRAF1-202ENST00000540010 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
TRAF1-202ENST00000540010 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
TRAF1-202ENST00000540010 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
TRAF1-202ENST00000540010 OXLD1Q5BKU9 147 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 COX17Q14061 63 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 IGHV3OR16-9A0A0B4J2B5 98 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 LRCOL1A6NCL2 159 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
TRAF1-202ENST00000540010 M0R378 163 aa6.96□□□□□ -1.29
TRAF1-202ENST00000540010 Q8N3U1 123 aa6.96□□□□□ -1.29
TRAF1-202ENST00000540010 CSNK1G2-AS1Q8NCQ2 148 aa6.96□□□□□ -1.29
TRAF1-202ENST00000540010 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
TRAF1-202ENST00000540010 AKAP9Q99996 3911 aa6.96□□□□□ -1.3
TRAF1-202ENST00000540010 ANK3Q12955 4377 aaKnown RBP6.95□□□□□ -1.3
TRAF1-202ENST00000540010 IL17DQ8TAD2 202 aa6.95□□□□□ -1.3
TRAF1-202ENST00000540010 A0A0J9YWU9 116 aa6.95□□□□□ -1.3
TRAF1-202ENST00000540010 SBSPONQ8IVN8 264 aa6.95□□□□□ -1.3
TRAF1-202ENST00000540010 TRBV7-7A0A0K0K1E9 115 aa6.95□□□□□ -1.3
TRAF1-202ENST00000540010 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
TRAF1-202ENST00000540010 CUBNO60494 3623 aa6.94□□□□□ -1.3
TRAF1-202ENST00000540010 IGHV4-30-4P0DP06 118 aa6.94□□□□□ -1.3
TRAF1-202ENST00000540010 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
TRAF1-202ENST00000540010 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
TRAF1-202ENST00000540010 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
TRAF1-202ENST00000540010 KIR2DL5BQ8NHK3 375 aa6.94□□□□□ -1.3
TRAF1-202ENST00000540010 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
TRAF1-202ENST00000540010 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
TRAF1-202ENST00000540010 RETNQ9HD89 108 aa6.93□□□□□ -1.3
TRAF1-202ENST00000540010 NANOS2P60321 138 aaKnown RBP6.92□□□□□ -1.3
TRAF1-202ENST00000540010 TRAV7A0A075B6U4 112 aa6.92□□□□□ -1.3
TRAF1-202ENST00000540010 KRTAP24-1Q3LI83 254 aa6.92□□□□□ -1.3
TRAF1-202ENST00000540010 LITAFQ99732 161 aa6.92□□□□□ -1.3
TRAF1-202ENST00000540010 Q8N9L7 120 aa6.91□□□□□ -1.3
TRAF1-202ENST00000540010 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
TRAF1-202ENST00000540010 X6R8D5 127 aa6.91□□□□□ -1.3
TRAF1-202ENST00000540010 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
TRAF1-202ENST00000540010 Q6ZVQ6 151 aa6.91□□□□□ -1.3
TRAF1-202ENST00000540010 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
TRAF1-202ENST00000540010 NDUFC1O43677 76 aa6.9□□□□□ -1.31
TRAF1-202ENST00000540010 LINC00575Q6W349 94 aa6.9□□□□□ -1.31
TRAF1-202ENST00000540010 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
TRAF1-202ENST00000540010 Q6ZTC4 211 aa6.89□□□□□ -1.31
TRAF1-202ENST00000540010 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
TRAF1-202ENST00000540010 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
TRAF1-202ENST00000540010 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
TRAF1-202ENST00000540010 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 B9D2Q9BPU9 175 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 TENM1Q9UKZ4 2725 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
TRAF1-202ENST00000540010 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms