RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 hADV29S1A0JD25 119 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 KNCNA6PVL3 124 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 K7EQD1 137 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 TMEM243Q9BU79 118 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 SND1-IT1Q9HBX3 110 aa5.35□□□□□ -1.55
CCDC60-204ENST00000539847 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 Q9UF83 564 aa5.34□□□□□ -1.55
CCDC60-204ENST00000539847 A0A087WZ39 114 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 TRBV6-4A0A1B0GX49 114 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 CCL18P55774 89 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 NTM-AS1Q6ZSK4 140 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 ORMDL1Q9P0S3 153 aa5.33□□□□□ -1.56
CCDC60-204ENST00000539847 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 LOC107984640A0A0U1RRK4 108 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
CCDC60-204ENST00000539847 TMEM256-PLSCR3K7ERE1 68 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 DEFB114Q30KQ6 69 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 TM2D3Q9BRN9 247 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 MAP6D1Q9H9H5 199 aa5.32□□□□□ -1.56
CCDC60-204ENST00000539847 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 EPM2AB3EWF7 344 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 UBE2L6O14933 153 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 HTN1P15515 57 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 LINC00158P58513 81 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 Q9HAA7 133 aa5.31□□□□□ -1.56
CCDC60-204ENST00000539847 A0A087WYN8 130 aa5.3□□□□□ -1.56
CCDC60-204ENST00000539847 PDE6GP18545 87 aa5.3□□□□□ -1.56
CCDC60-204ENST00000539847 DEFB136Q30KP8 78 aa5.3□□□□□ -1.56
CCDC60-204ENST00000539847 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
CCDC60-204ENST00000539847 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
CCDC60-204ENST00000539847 A0A0U1RRA0 63 aa5.29□□□□□ -1.56
CCDC60-204ENST00000539847 LECT2O14960 151 aa5.29□□□□□ -1.56
CCDC60-204ENST00000539847 COX17Q14061 63 aa5.29□□□□□ -1.56
CCDC60-204ENST00000539847 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
CCDC60-204ENST00000539847 LYSTQ99698 3801 aa5.29□□□□□ -1.56
CCDC60-204ENST00000539847 TRAV7A0A075B6U4 112 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 TRGV1A0A0A0MS02 117 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 IGKV3D-7A0A0C4DH55 119 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 Q8IZM0 81 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 Q8N814 137 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 DYNLRB2Q8TF09 96 aa5.28□□□□□ -1.56
CCDC60-204ENST00000539847 CSMD3Q7Z407 3707 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 LOC110117498A0A087WWA1 95 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 A0A1B0GUV1 79 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 SS18Q15532 418 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 STHQ8IWL8 128 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 C16orf74Q96GX8 76 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 UBL5Q9BZL1 73 aa5.27□□□□□ -1.57
CCDC60-204ENST00000539847 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 IGHV4-28A0A0C4DH34 117 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 NCR3O14931 201 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 NDUFC1O43677 76 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 IGHV4-30-4P0DP06 118 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
CCDC60-204ENST00000539847 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
CCDC60-204ENST00000539847 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
CCDC60-204ENST00000539847 PRM2P04554 102 aa5.25□□□□□ -1.57
CCDC60-204ENST00000539847 ODF3L2Q3SX64 289 aa5.25□□□□□ -1.57
CCDC60-204ENST00000539847 Q6ZTI0 123 aa5.25□□□□□ -1.57
CCDC60-204ENST00000539847 XCL2Q9UBD3 114 aa5.25□□□□□ -1.57
CCDC60-204ENST00000539847 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 XCL1P47992 114 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
CCDC60-204ENST00000539847 CXCL6P80162 114 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 Q5XG85 94 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 C6orf223Q8N319 242 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 TOMM7Q9P0U1 55 aa5.24□□□□□ -1.57
CCDC60-204ENST00000539847 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
CCDC60-204ENST00000539847 KIR2DL5BQ8NHK3 375 aa5.23□□□□□ -1.57
CCDC60-204ENST00000539847 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
CCDC60-204ENST00000539847 A0A087WVE0 104 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 FAM236DA0A1B0GTK5 79 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 ERC2-IT1O76042 136 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 FAM236CP0DP71 79 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
CCDC60-204ENST00000539847 RBM3P98179 157 aaKnown RBP5.22□□□□□ -1.57
CCDC60-204ENST00000539847 FHL2Q14192 279 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 LINC00575Q6W349 94 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 Q6ZQT0 140 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 NOP10Q9NPE3 64 aaKnown RBP5.22□□□□□ -1.57
CCDC60-204ENST00000539847 NACAE9PAV3 2078 aa5.22□□□□□ -1.57
CCDC60-204ENST00000539847 PLECQ15149 4684 aaKnown RBP5.21□□□□□ -1.58
CCDC60-204ENST00000539847 IGLV4-60A0A075B6I1 120 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 TRGV2A0A075B6R0 118 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 TRGV4A0A0C4DH28 118 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms