RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.3
SCARB1-206ENST00000539320 KRTAP13-1Q8IUC0 172 aa13.15□□□□□ -0.3
SCARB1-206ENST00000539320 A0A087X002 238 aa13.14□□□□□ -0.31
SCARB1-206ENST00000539320 VPREB1P12018 145 aa13.14□□□□□ -0.31
SCARB1-206ENST00000539320 COX17Q14061 63 aa13.14□□□□□ -0.31
SCARB1-206ENST00000539320 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
SCARB1-206ENST00000539320 SERF1AO75920 110 aa13.13□□□□□ -0.31
SCARB1-206ENST00000539320 CRYGAP11844 174 aa13.13□□□□□ -0.31
SCARB1-206ENST00000539320 ZNF625Q96I27 306 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-206ENST00000539320 PRR4Q16378 134 aa13.12□□□□□ -0.31
SCARB1-206ENST00000539320 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
SCARB1-206ENST00000539320 LINC00310P59036 64 aa13.11□□□□□ -0.31
SCARB1-206ENST00000539320 RPL24P83731 157 aaKnown RBP13.11□□□□□ -0.31
SCARB1-206ENST00000539320 TYMSOSQ8TAI1 123 aa13.1□□□□□ -0.31
SCARB1-206ENST00000539320 CHCHD1Q96BP2 118 aaKnown RBP13.09□□□□□ -0.31
SCARB1-206ENST00000539320 HSBP1O75506 76 aa13.08□□□□□ -0.32
SCARB1-206ENST00000539320 TRAV12-1A0A0B4J245 112 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 TSPAN13O95857 204 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 S100A6P06703 90 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 PRLHP81277 87 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
SCARB1-206ENST00000539320 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
SCARB1-206ENST00000539320 FAM19A1Q7Z5A9 133 aa13.06□□□□□ -0.32
SCARB1-206ENST00000539320 Q8NDZ9 215 aa13.06□□□□□ -0.32
SCARB1-206ENST00000539320 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
SCARB1-206ENST00000539320 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
SCARB1-206ENST00000539320 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
SCARB1-206ENST00000539320 M0R378 163 aa13.03□□□□□ -0.32
SCARB1-206ENST00000539320 LINC00158P58513 81 aa13.03□□□□□ -0.32
SCARB1-206ENST00000539320 KRTAP13-2Q52LG2 175 aa13.03□□□□□ -0.32
SCARB1-206ENST00000539320 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
SCARB1-206ENST00000539320 A0A0U1RRA0 63 aa13□□□□□ -0.33
SCARB1-206ENST00000539320 FABP4P15090 132 aa12.99□□□□□ -0.33
SCARB1-206ENST00000539320 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
SCARB1-206ENST00000539320 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
SCARB1-206ENST00000539320 LINC00304Q8N9R0 145 aa12.97□□□□□ -0.33
SCARB1-206ENST00000539320 IGKV2D-26A0A0A0MRZ7 120 aa12.96□□□□□ -0.33
SCARB1-206ENST00000539320 C5orf52A6NGY3 159 aa12.96□□□□□ -0.33
SCARB1-206ENST00000539320 SMIM13P0DJ93 91 aa12.96□□□□□ -0.33
SCARB1-206ENST00000539320 S100A2P29034 98 aa12.96□□□□□ -0.33
SCARB1-206ENST00000539320 LEPROTL1O95214 131 aa12.95□□□□□ -0.34
SCARB1-206ENST00000539320 HERV-K104P63124 156 aa12.94□□□□□ -0.34
SCARB1-206ENST00000539320 HIGD2AQ9BW72 106 aa12.94□□□□□ -0.34
SCARB1-206ENST00000539320 BOD1L2Q8IYS8 172 aa12.93□□□□□ -0.34
SCARB1-206ENST00000539320 MIR7-3HGQ8N6C7 128 aa12.93□□□□□ -0.34
SCARB1-206ENST00000539320 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
SCARB1-206ENST00000539320 NDUFA12Q9UI09 145 aa12.93□□□□□ -0.34
SCARB1-206ENST00000539320 H0Y8G0 127 aa12.92□□□□□ -0.34
SCARB1-206ENST00000539320 HIST1H2BLQ99880 126 aa12.91□□□□□ -0.34
SCARB1-206ENST00000539320 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
SCARB1-206ENST00000539320 PRYO14603 147 aa12.9□□□□□ -0.34
SCARB1-206ENST00000539320 NCR3O14931 201 aa12.9□□□□□ -0.34
SCARB1-206ENST00000539320 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
SCARB1-206ENST00000539320 LINC00587B1AMM8 73 aa12.89□□□□□ -0.35
SCARB1-206ENST00000539320 RETNLBQ9BQ08 111 aa12.88□□□□□ -0.35
SCARB1-206ENST00000539320 C3orf22Q8N5N4 141 aa12.87□□□□□ -0.35
SCARB1-206ENST00000539320 SPRR4Q96PI1 79 aa12.87□□□□□ -0.35
SCARB1-206ENST00000539320 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
SCARB1-206ENST00000539320 TSPEAR-AS2P59090 65 aa12.86□□□□□ -0.35
SCARB1-206ENST00000539320 KRTDAPP60985 99 aa12.86□□□□□ -0.35
SCARB1-206ENST00000539320 ZNF706Q9Y5V0 76 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-206ENST00000539320 PLNP26678 52 aa12.85□□□□□ -0.35
SCARB1-206ENST00000539320 LEPROTO15243 131 aa12.84□□□□□ -0.35
SCARB1-206ENST00000539320 SPRR1AP35321 89 aa12.84□□□□□ -0.35
SCARB1-206ENST00000539320 CTAG1AP78358 180 aa12.84□□□□□ -0.35
SCARB1-206ENST00000539320 LINC00337Q8N6G1 96 aa12.84□□□□□ -0.35
SCARB1-206ENST00000539320 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
SCARB1-206ENST00000539320 C3orf79P0CE67 100 aa12.83□□□□□ -0.36
SCARB1-206ENST00000539320 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
SCARB1-206ENST00000539320 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
SCARB1-206ENST00000539320 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
SCARB1-206ENST00000539320 DPM2O94777 84 aa12.81□□□□□ -0.36
SCARB1-206ENST00000539320 HERVK_113P61574 105 aa12.81□□□□□ -0.36
SCARB1-206ENST00000539320 MUC2Q02817 5179 aa12.81□□□□□ -0.36
SCARB1-206ENST00000539320 DAND5Q8N907 189 aa12.8□□□□□ -0.36
SCARB1-206ENST00000539320 PMCHL2Q9BQD1 86 aa12.8□□□□□ -0.36
SCARB1-206ENST00000539320 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
SCARB1-206ENST00000539320 J3QQQ9 107 aa12.79□□□□□ -0.36
SCARB1-206ENST00000539320 LOC107984156A0A0G2JMH3 177 aa12.78□□□□□ -0.36
SCARB1-206ENST00000539320 S100A12P80511 92 aa12.78□□□□□ -0.36
SCARB1-206ENST00000539320 ARL17AQ8IVW1 177 aa12.78□□□□□ -0.36
SCARB1-206ENST00000539320 IGKCP01834 107 aa12.77□□□□□ -0.37
SCARB1-206ENST00000539320 NMUP48645 174 aa12.77□□□□□ -0.37
SCARB1-206ENST00000539320 SPAG11AQ6PDA7 123 aa12.77□□□□□ -0.37
SCARB1-206ENST00000539320 SMCR5Q8TEV8 140 aa12.77□□□□□ -0.37
SCARB1-206ENST00000539320 IGLV7-46A0A075B6I9 117 aa12.76□□□□□ -0.37
SCARB1-206ENST00000539320 LGALS3P17931 250 aaKnown RBP12.76□□□□□ -0.37
SCARB1-206ENST00000539320 TPRXLQ17RH7 258 aa12.76□□□□□ -0.37
SCARB1-206ENST00000539320 PET117Q6UWS5 81 aa12.76□□□□□ -0.37
SCARB1-206ENST00000539320 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
SCARB1-206ENST00000539320 MUC17Q685J3 4493 aa12.74□□□□□ -0.37
SCARB1-206ENST00000539320 DDTP30046 118 aa12.74□□□□□ -0.37
SCARB1-206ENST00000539320 AKR1D1P51857 326 aa12.74□□□□□ -0.37
SCARB1-206ENST00000539320 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
SCARB1-206ENST00000539320 SPANXB1Q9NS25 103 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-206ENST00000539320 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
SCARB1-206ENST00000539320 PPDPFQ9H3Y8 114 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms