RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 DPY30Q9C005 99 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 PROK2Q9HC23 129 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 HIGD1BQ9P298 99 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 EP300Q09472 2414 aaPredicted RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV7-1A0A0A6YYK4 115 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 SFT2D2O95562 160 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TPPP2P59282 170 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 MIR22HGQ0VDD5 57 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 CSAG1Q6PB30 78 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 PRELID3AQ96N28 172 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 PRO1933Q9H354 126 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 BANF2Q9H503 90 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 CEP290O15078 2479 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TRAV22A0A0B4J277 110 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV6-5A0A0K0K1A5 114 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 C2orf70A6NJV1 201 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 IGLC2P0DOY2 106 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 IGLC3P0DOY3 106 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 IL7P13232 177 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 SNCAP37840 140 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 CCL8P80075 99 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 ESRGQ1W209 222 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 SPINK13Q1W4C9 94 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 HEPN1Q6WQI6 88 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 LINC00322Q6ZN03 302 aaPredicted RBP0.33□□□□□ -2.36
HIF1A-204ENST00000539097 SLC25A26Q70HW3 274 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TMEM254Q8TBM7 123 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 PLIN4Q96Q06 1357 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TRAV17A0A0B4J275 112 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV6-4A0A1B0GX49 114 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 C5orf67F2Z3F1 127 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 BVES-AS1Q5T3Y7 98 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 C6orf52Q5T4I8 152 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 OR2T2Q6IF00 324 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 CLEC2BQ92478 149 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 ORMDL1Q9P0S3 153 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 NDUFA12Q9UI09 145 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 MGAQ8IWI9 3026 aa0.33□□□□□ -2.36
HIF1A-204ENST00000539097 TRAV13-2A0A0B4J235 113 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 F8W1H4 67 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 K7EIL1 84 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 PMP2P02689 132 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 IL5P05113 134 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 AKAIN1P0CW23 69 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 Q96NJ1 140 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 PDCD10Q9BUL8 212 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 SNURFQ9Y675 71 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 KIAA0100Q14667 2235 aaKnown RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 ESPL1Q14674 2120 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 A0A096LNT2 108 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 TRBV7-4A0A0J9YYF1 115 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 LINC00959A0A1B0GUT2 108 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 SYS1-DBNDD2H3BUS1 97 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 EIF5AP63241 154 aaKnown RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 C9orf116Q5BN46 136 aaPredicted RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 NMSQ5H8A3 153 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 XAF1Q6GPH4 301 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 IFT20Q8IY31 132 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 FAM213BQ8TBF2 198 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 NOP16Q9Y3C1 178 aaKnown RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 MGAM2Q2M2H8 2515 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 hADV29S1A0JD25 119 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 CFDP00746 253 aaPredicted RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 CRPP02741 224 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 PDE6GP18545 87 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 HINT1P49773 126 aaPredicted RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 PRB3Q04118 309 aaPredicted RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 WFDC2Q14508 124 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 C12orf73Q69YU5 71 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 CIB3Q96Q77 187 aaPredicted RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 C10orf95Q9H7T3 257 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 V9GYS6 101 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 SPTAN1Q13813 2472 aaKnown RBP0.32□□□□□ -2.36
HIF1A-204ENST00000539097 CACNA1HO95180 2353 aa0.32□□□□□ -2.36
HIF1A-204ENST00000539097 NUPR2A6NF83 97 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 TRACP01848 142 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 ASIPP42127 132 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 LELP1Q5T871 98 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 OSTCQ9NRP0 149 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 ATMQ13315 3056 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 UBE2L5PA0A1B0GUS4 154 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 PIN1P1O15428 100 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 BCE1O60756 84 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 TIMM17BO60830 172 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 IGKCP01834 107 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 FABP2P12104 132 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 UBE2L3P68036 154 aaKnown RBP0.31□□□□□ -2.36
HIF1A-204ENST00000539097 FAM223AQ8IWN6 122 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 LINC00301Q8NCQ3 95 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 C18orf32Q8TCD1 76 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 CHCHD1Q96BP2 118 aaKnown RBP0.31□□□□□ -2.36
HIF1A-204ENST00000539097 TMEM141Q96I45 108 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 TRGV9Q99603 122 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 CYP4F30PQ9H0H9 118 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 H3BRM9 83 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 PIRTP0C851 137 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 S100A10P60903 97 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 UBA52P62987 128 aaKnown RBP0.31□□□□□ -2.36
HIF1A-204ENST00000539097 ALKAL2Q6UX46 152 aa0.31□□□□□ -2.36
HIF1A-204ENST00000539097 COA5Q86WW8 74 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms