RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 A0A0J9YXY3 114 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 TCRBV4S1A1TA0A5B7 111 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 A6NED7 52 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 C2orf70A6NJV1 201 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 K7EIL1 84 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 K7EQG2 157 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 SERF1AO75920 110 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 IGLV2-8P01709 118 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3-48P01763 117 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3-23P01764 117 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 TRGV3P03979 118 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 GIG44P09565 113 aaPredicted RBP1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 C3orf79P0CE67 100 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 CHTF8P0CG12 524 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 APELAP0DMC3 54 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 IAPPP10997 89 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 RNASE4P34096 147 aaKnown RBP1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 FAM104BQ5XKR9 115 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 CYP2G1PQ6ZSU1 146 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 FP248Q71RG6 208 aaPredicted RBP1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 Q8N8P6 123 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 Q8N976 141 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 SPTSSBQ8NFR3 76 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 GTSF1Q8WW33 167 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 DIRC1Q969H9 104 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 FAM167A-AS1Q96KT0 104 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 SCGB3A1Q96QR1 104 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 UPK3BQ9BT76 320 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 SCRT1Q9BWW7 348 aa1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 NHP2Q9NX24 153 aaKnown RBP1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 HSPG2P98160 4391 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 TMSB15BA0A087X1C1 80 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3-21A0A0B4J1V1 117 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV7-4-1A0A0J9YVY3 117 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 A0A1B0GW54 56 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CEBPZOSA8MTT3 80 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 F2Z2F3 143 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 K7ERS5 55 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 NDUFC1O43677 76 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3-11P01762 117 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 IL4P05112 153 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CCKP06307 115 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 ACYP1P07311 99 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 COX8AP10176 69 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 DEFA4P12838 97 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CMC4P56277 68 aaPredicted RBP1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 KRTAP10-10P60014 251 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 HIST1H4AP62805 103 aaKnown RBP1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 ERHP84090 104 aaKnown RBP1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CYCSP99999 105 aaKnown RBP1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 PLGLAQ15195 96 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 RHOHQ15669 191 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 DEFB114Q30KQ6 69 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 SPANXN5Q5MJ07 72 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 TMEM170BQ5T4T1 132 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 C9orf66Q5T8R8 295 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CFAP126Q5VTH2 177 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 SFTA2Q6UW10 78 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 ATP11AUNQ6ZP68 121 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 ORMDL3Q8N138 153 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 SLC25A29Q8N8R3 303 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CSNK1G2-AS1Q8NCQ2 148 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 DYNLRB2Q8TF09 96 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 RETNLBQ9BQ08 111 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 SLC50A1Q9BRV3 221 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 PSENENQ9NZ42 101 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 DHRS4-AS1Q9P1J3 65 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 HIGD1BQ9P298 99 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 PHLDA3Q9Y5J5 127 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 TIMM9Q9Y5J7 89 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 LY96Q9Y6Y9 160 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 S4R3C0 116 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 FAT1Q14517 4588 aa1.22□□□□□ -2.21
CBX3P4-201ENST00000538909 VPS13BQ7Z7G8 4022 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-74A0A0B4J1X5 117 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 C11orf94C9JXX5 98 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 H3BMM0 161 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 APCSP02743 223 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 GCHFRP30047 84 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 FXYD7P58549 80 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 TSPEAR-AS2P59090 65 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 SERF2P84101 59 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 PDE6HQ13956 83 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 MRPL51Q4U2R6 128 aaKnown RBP1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 LUZP6Q538Z0 58 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 SPANXN1Q5VSR9 72 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 ZFP2Q6ZN57 461 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 Q6ZRP5 223 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC00643Q86TS7 51 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC00269Q8N2A0 174 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 UBE2WQ96B02 151 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 ODF3Q96PU9 254 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 CAMK2N2Q96S95 79 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 SMIM7Q9BQ49 75 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 RHPN1-AS1Q9BWJ2 59 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 OCR1Q9BZK8 76 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms