RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
CD4-208ENST00000538827 XAGE1AQ9HD64 81 aa9.13□□□□□ -0.95
CD4-208ENST00000538827 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 BATFQ16520 125 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 CEND1Q8N111 149 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
CD4-208ENST00000538827 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
CD4-208ENST00000538827 M0R143 59 aa9.11□□□□□ -0.95
CD4-208ENST00000538827 IFITM1P13164 125 aa9.11□□□□□ -0.95
CD4-208ENST00000538827 PTTG1IPP53801 180 aa9.11□□□□□ -0.95
CD4-208ENST00000538827 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
CD4-208ENST00000538827 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
CD4-208ENST00000538827 HSPG2P98160 4391 aa9.1□□□□□ -0.95
CD4-208ENST00000538827 A0A096LNI7 61 aa9.09□□□□□ -0.95
CD4-208ENST00000538827 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
CD4-208ENST00000538827 FXYD2P54710 66 aa9.09□□□□□ -0.95
CD4-208ENST00000538827 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
CD4-208ENST00000538827 A6NJY4 79 aa9.08□□□□□ -0.96
CD4-208ENST00000538827 CHTF8P0CG12 524 aa9.08□□□□□ -0.96
CD4-208ENST00000538827 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
CD4-208ENST00000538827 A4D1N5 150 aa9.07□□□□□ -0.96
CD4-208ENST00000538827 NCR3O14931 201 aa9.07□□□□□ -0.96
CD4-208ENST00000538827 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
CD4-208ENST00000538827 C16orf90A8MZG2 172 aa9.06□□□□□ -0.96
CD4-208ENST00000538827 PKD1P98161 4303 aa9.05□□□□□ -0.96
CD4-208ENST00000538827 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
CD4-208ENST00000538827 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
CD4-208ENST00000538827 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
CD4-208ENST00000538827 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
CD4-208ENST00000538827 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 K7ERJ3 54 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 SERTAD4-AS1Q5TG53 156 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 Q8NDZ9 215 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
CD4-208ENST00000538827 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 A6NDN8 102 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 VPREB1P12018 145 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 SNHG12Q9BXW3 62 aa9.02□□□□□ -0.97
CD4-208ENST00000538827 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
CD4-208ENST00000538827 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
CD4-208ENST00000538827 NDUFC2O95298 119 aa9.01□□□□□ -0.97
CD4-208ENST00000538827 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
CD4-208ENST00000538827 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
CD4-208ENST00000538827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
CD4-208ENST00000538827 A0A0B4J2C4 111 aa9□□□□□ -0.97
CD4-208ENST00000538827 PANO1I0J062 215 aa9□□□□□ -0.97
CD4-208ENST00000538827 CFC1BP0CG36 223 aa9□□□□□ -0.97
CD4-208ENST00000538827 CFC1P0CG37 223 aa9□□□□□ -0.97
CD4-208ENST00000538827 OR13C6PQ8NH95 151 aa9□□□□□ -0.97
CD4-208ENST00000538827 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
CD4-208ENST00000538827 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
CD4-208ENST00000538827 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
CD4-208ENST00000538827 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
CD4-208ENST00000538827 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 H7C2G1 150 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 M0QXV9 152 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 S100A7L2Q5SY68 101 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 PLA2G2DQ9UNK4 145 aa8.98□□□□□ -0.97
CD4-208ENST00000538827 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
CD4-208ENST00000538827 Q1RN00 199 aa8.97□□□□□ -0.97
CD4-208ENST00000538827 Q8N1X5 172 aa8.97□□□□□ -0.97
CD4-208ENST00000538827 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
CD4-208ENST00000538827 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
CD4-208ENST00000538827 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.98
CD4-208ENST00000538827 M0R378 163 aa8.96□□□□□ -0.98
CD4-208ENST00000538827 A0A087WYN8 130 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
CD4-208ENST00000538827 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
CD4-208ENST00000538827 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
CD4-208ENST00000538827 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
CD4-208ENST00000538827 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
CD4-208ENST00000538827 HAMPP81172 84 aa8.93□□□□□ -0.98
CD4-208ENST00000538827 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
CD4-208ENST00000538827 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
CD4-208ENST00000538827 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
CD4-208ENST00000538827 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
CD4-208ENST00000538827 UBE2BP63146 152 aa8.92□□□□□ -0.98
CD4-208ENST00000538827 TSPAN13O95857 204 aa8.91□□□□□ -0.98
CD4-208ENST00000538827 LBHQ53QV2 105 aaPredicted RBP8.91□□□□□ -0.98
CD4-208ENST00000538827 LINC00167Q96N53 147 aa8.91□□□□□ -0.98
CD4-208ENST00000538827 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
CD4-208ENST00000538827 TMEM126AQ9H061 195 aa8.91□□□□□ -0.98
CD4-208ENST00000538827 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.98
CD4-208ENST00000538827 TRAV23DV6A0A075B6W5 121 aa8.9□□□□□ -0.98
CD4-208ENST00000538827 PSMB2P49721 201 aa8.9□□□□□ -0.98
CD4-208ENST00000538827 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms