RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 I3L3M4 83 aa6.26□□□□□ -1.41
VPS37C-204ENST00000538036 UBE2D1P51668 147 aa6.26□□□□□ -1.41
VPS37C-204ENST00000538036 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
VPS37C-204ENST00000538036 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
VPS37C-204ENST00000538036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.25□□□□□ -1.41
VPS37C-204ENST00000538036 IGKV2-29A2NJV5 120 aaPredicted RBP6.25□□□□□ -1.41
VPS37C-204ENST00000538036 PCP4P48539 62 aa6.25□□□□□ -1.41
VPS37C-204ENST00000538036 SS18Q15532 418 aa6.25□□□□□ -1.41
VPS37C-204ENST00000538036 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
VPS37C-204ENST00000538036 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
VPS37C-204ENST00000538036 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
VPS37C-204ENST00000538036 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
VPS37C-204ENST00000538036 GAGE2BQ13066 116 aa6.24□□□□□ -1.41
VPS37C-204ENST00000538036 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
VPS37C-204ENST00000538036 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 LEPROTO15243 131 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 APOMO95445 188 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 PLEKHB2Q96CS7 222 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 AMELXQ99217 191 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 VPS25Q9BRG1 176 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 LPAP08519 4548 aa6.23□□□□□ -1.41
VPS37C-204ENST00000538036 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 TMEM223A0PJW6 202 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 J3QR89 54 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 C9orf116Q5BN46 136 aaPredicted RBP6.22□□□□□ -1.41
VPS37C-204ENST00000538036 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
VPS37C-204ENST00000538036 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 J3QQQ9 107 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 M0QXV9 152 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 MALP21145 153 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 MRPS36P82909 103 aaKnown RBP6.21□□□□□ -1.42
VPS37C-204ENST00000538036 SCGB1D4Q6XE38 83 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 C2orf48Q96LS8 159 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 PRO0461Q9UI25 63 aa6.21□□□□□ -1.42
VPS37C-204ENST00000538036 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 K7ERJ3 54 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 COX7A2LO14548 114 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
VPS37C-204ENST00000538036 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
VPS37C-204ENST00000538036 TIMM21Q9BVV7 248 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 VCX2Q9H322 139 aa6.2□□□□□ -1.42
VPS37C-204ENST00000538036 MUC2Q02817 5179 aa6.19□□□□□ -1.42
VPS37C-204ENST00000538036 H0Y9J4 135 aa6.19□□□□□ -1.42
VPS37C-204ENST00000538036 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
VPS37C-204ENST00000538036 ZNF22P17026 224 aaPredicted RBP6.19□□□□□ -1.42
VPS37C-204ENST00000538036 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
VPS37C-204ENST00000538036 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
VPS37C-204ENST00000538036 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
VPS37C-204ENST00000538036 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 F8WDY8 70 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 H3BMG7 143 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 RPL13AP40429 203 aaKnown RBP6.18□□□□□ -1.42
VPS37C-204ENST00000538036 PRR4Q16378 134 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 PHF5AQ7RTV0 110 aaKnown RBP6.18□□□□□ -1.42
VPS37C-204ENST00000538036 FAM19A3Q7Z5A8 133 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
VPS37C-204ENST00000538036 CSDC2Q9Y534 153 aaKnown RBP6.18□□□□□ -1.42
VPS37C-204ENST00000538036 A0A087WZ39 114 aa6.17□□□□□ -1.42
VPS37C-204ENST00000538036 TMEM238C9JI98 176 aa6.17□□□□□ -1.42
VPS37C-204ENST00000538036 TIMM17BO60830 172 aa6.17□□□□□ -1.42
VPS37C-204ENST00000538036 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
VPS37C-204ENST00000538036 RPL18AQ02543 176 aaKnown RBP6.17□□□□□ -1.42
VPS37C-204ENST00000538036 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
VPS37C-204ENST00000538036 PRO1854Q9UHT4 67 aa6.17□□□□□ -1.42
VPS37C-204ENST00000538036 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 TSPAN13O95857 204 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 CFC1BP0CG36 223 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 CFC1P0CG37 223 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
VPS37C-204ENST00000538036 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
VPS37C-204ENST00000538036 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.42
VPS37C-204ENST00000538036 SPANXDQ9BXN6 97 aa6.15□□□□□ -1.42
VPS37C-204ENST00000538036 SPANXCQ9NY87 97 aa6.15□□□□□ -1.42
VPS37C-204ENST00000538036 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
VPS37C-204ENST00000538036 TLX1NBP0CAT3 122 aa6.14□□□□□ -1.43
VPS37C-204ENST00000538036 IFITM1P13164 125 aa6.14□□□□□ -1.43
VPS37C-204ENST00000538036 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
VPS37C-204ENST00000538036 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
VPS37C-204ENST00000538036 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
VPS37C-204ENST00000538036 C5orf38Q86SI9 138 aa6.13□□□□□ -1.43
VPS37C-204ENST00000538036 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
VPS37C-204ENST00000538036 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 KRTAP9-6A0A140TA67 174 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 A4D1N5 150 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 NDUFA1O15239 70 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
VPS37C-204ENST00000538036 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 LITAFQ99732 161 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
VPS37C-204ENST00000538036 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
VPS37C-204ENST00000538036 TEN1Q86WV5 123 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms