RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TMEM238C9JI98 176 aa5.65□□□□□ -1.5
CHD4-207ENST00000537634 TMEM170BQ5T4T1 132 aa5.65□□□□□ -1.5
CHD4-207ENST00000537634 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
CHD4-207ENST00000537634 COMMD7Q86VX2 200 aa5.65□□□□□ -1.5
CHD4-207ENST00000537634 ZNF625Q96I27 306 aaPredicted RBP5.65□□□□□ -1.5
CHD4-207ENST00000537634 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 LINC00614P0C842 121 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 IFITM2Q01629 132 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 PMCHL1Q16048 86 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 BAGE3Q86Y29 109 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 C18orf32Q8TCD1 76 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
CHD4-207ENST00000537634 M0R378 163 aa5.63□□□□□ -1.51
CHD4-207ENST00000537634 C10orf91Q5T1B1 145 aa5.63□□□□□ -1.51
CHD4-207ENST00000537634 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
CHD4-207ENST00000537634 CBLN2Q8IUK8 224 aa5.62□□□□□ -1.51
CHD4-207ENST00000537634 LINC00158P58513 81 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 CTAG1AP78358 180 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 SLC7A5P1Q8MH63 180 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 Q8NDZ9 215 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 HIGD2AQ9BW72 106 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
CHD4-207ENST00000537634 CHTOPQ9Y3Y2 248 aaKnown RBP5.61□□□□□ -1.51
CHD4-207ENST00000537634 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
CHD4-207ENST00000537634 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
CHD4-207ENST00000537634 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
CHD4-207ENST00000537634 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
CHD4-207ENST00000537634 C3orf22Q8N5N4 141 aa5.59□□□□□ -1.51
CHD4-207ENST00000537634 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
CHD4-207ENST00000537634 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
CHD4-207ENST00000537634 TRAV12-1A0A0B4J245 112 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 PRYO14603 147 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 APOC3P02656 99 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 NDUFA5Q16718 116 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 MEIG1Q5JSS6 88 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 IFI27L1Q96BM0 104 aa5.57□□□□□ -1.52
CHD4-207ENST00000537634 NCR3O14931 201 aa5.56□□□□□ -1.52
CHD4-207ENST00000537634 SNAPINO95295 136 aa5.56□□□□□ -1.52
CHD4-207ENST00000537634 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
CHD4-207ENST00000537634 SVBPQ8N300 66 aa5.56□□□□□ -1.52
CHD4-207ENST00000537634 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
CHD4-207ENST00000537634 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
CHD4-207ENST00000537634 HERV-K104P63124 156 aa5.55□□□□□ -1.52
CHD4-207ENST00000537634 MIR7-3HGQ8N6C7 128 aa5.55□□□□□ -1.52
CHD4-207ENST00000537634 MUC2Q02817 5179 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 ETDCA0A1B0GVM5 59 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 LINC00587B1AMM8 73 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 KCNQ1DNQ9H478 68 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 NDUFA12Q9UI09 145 aa5.54□□□□□ -1.52
CHD4-207ENST00000537634 MYMXA0A1B0GTQ4 84 aa5.53□□□□□ -1.52
CHD4-207ENST00000537634 HSBP1O75506 76 aa5.53□□□□□ -1.52
CHD4-207ENST00000537634 SPRR1AP35321 89 aa5.53□□□□□ -1.52
CHD4-207ENST00000537634 S100A12P80511 92 aa5.53□□□□□ -1.52
CHD4-207ENST00000537634 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
CHD4-207ENST00000537634 Q8NBF4 154 aa5.53□□□□□ -1.52
CHD4-207ENST00000537634 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
CHD4-207ENST00000537634 H0Y8G0 127 aa5.52□□□□□ -1.53
CHD4-207ENST00000537634 DAND5Q8N907 189 aa5.52□□□□□ -1.53
CHD4-207ENST00000537634 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
CHD4-207ENST00000537634 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
CHD4-207ENST00000537634 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
CHD4-207ENST00000537634 YPEL4Q96NS1 127 aa5.51□□□□□ -1.53
CHD4-207ENST00000537634 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
CHD4-207ENST00000537634 SPINK1P00995 79 aa5.5□□□□□ -1.53
CHD4-207ENST00000537634 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
CHD4-207ENST00000537634 DDTP30046 118 aa5.49□□□□□ -1.53
CHD4-207ENST00000537634 XP32Q5T750 250 aa5.49□□□□□ -1.53
CHD4-207ENST00000537634 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
CHD4-207ENST00000537634 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
CHD4-207ENST00000537634 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 TRBV10-2A0A0K0K1G8 114 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 B5MCH6 92 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 LEPROTO15243 131 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 LEPROTL1O95214 131 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 PLNP26678 52 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 MOBPQ13875 183 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
CHD4-207ENST00000537634 LOC107984156A0A0G2JMH3 177 aa5.47□□□□□ -1.53
CHD4-207ENST00000537634 HERVK_113P61574 105 aa5.47□□□□□ -1.53
CHD4-207ENST00000537634 ARL17AQ8IVW1 177 aa5.47□□□□□ -1.53
CHD4-207ENST00000537634 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
CHD4-207ENST00000537634 J3QQQ9 107 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 SERF1AO75920 110 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 ERC2-IT1O76042 136 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 TRGC2P03986 189 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 LGALS3P17931 250 aaKnown RBP5.46□□□□□ -1.54
CHD4-207ENST00000537634 NMUP48645 174 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 S100A7L2Q5SY68 101 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 Q6ZRX8 168 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 SSBP3-AS1Q7Z2R9 100 aa5.46□□□□□ -1.54
CHD4-207ENST00000537634 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms