RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 A6NDX4 124 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 C3orf84H3BNL1 204 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 MP68P56378 58 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 Q8NDZ9 215 aa5.73□□□□□ -1.49
SRGAP1-202ENST00000537556 H3BUX3 64 aa5.72□□□□□ -1.49
SRGAP1-202ENST00000537556 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
SRGAP1-202ENST00000537556 C11orf71Q6IPW1 123 aa5.72□□□□□ -1.49
SRGAP1-202ENST00000537556 IGHV4-61A0A0C4DH41 118 aa5.71□□□□□ -1.49
SRGAP1-202ENST00000537556 CEP295Q9C0D2 2601 aa5.71□□□□□ -1.5
SRGAP1-202ENST00000537556 AKAP13Q12802 2813 aa5.71□□□□□ -1.5
SRGAP1-202ENST00000537556 EPG5Q9HCE0 2579 aa5.71□□□□□ -1.5
SRGAP1-202ENST00000537556 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-202ENST00000537556 BRD3OSQ6XYD6 125 aa5.71□□□□□ -1.5
SRGAP1-202ENST00000537556 CHD8Q9HCK8 2581 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 LRBAP50851 2863 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 LOC100131303A0A0U1RQF7 123 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 DCHS2Q6V1P9 2916 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 A0A1B0GUV1 79 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 ST20-AS1Q8NBB2 130 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 MAP6D1Q9H9H5 199 aa5.7□□□□□ -1.5
SRGAP1-202ENST00000537556 IGHV4-59P01825 116 aa5.69□□□□□ -1.5
SRGAP1-202ENST00000537556 MOBPQ13875 183 aa5.69□□□□□ -1.5
SRGAP1-202ENST00000537556 ANKHD1Q8IWZ3 2542 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-202ENST00000537556 NOP10Q9NPE3 64 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-202ENST00000537556 SVEP1Q4LDE5 3571 aa5.68□□□□□ -1.5
SRGAP1-202ENST00000537556 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
SRGAP1-202ENST00000537556 C2CD3Q4AC94 2353 aa5.68□□□□□ -1.5
SRGAP1-202ENST00000537556 WFDC10AQ9H1F0 79 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 CREBBPQ92793 2442 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 RELNP78509 3460 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 PKD1L2Q7Z442 2459 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 FAM208BQ5VWN6 2430 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 FBXL19-AS1Q494R0 122 aa5.67□□□□□ -1.5
SRGAP1-202ENST00000537556 H3BPC8 53 aa5.66□□□□□ -1.5
SRGAP1-202ENST00000537556 IGF2RP11717 2491 aa5.66□□□□□ -1.5
SRGAP1-202ENST00000537556 ITPR1Q14643 2758 aa5.66□□□□□ -1.5
SRGAP1-202ENST00000537556 A0A0J9YWU9 116 aa5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 KHDC1LQ5JSQ8 128 aa5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 KPRPQ5T749 579 aaPredicted RBP5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 CLPSL2Q6UWE3 100 aa5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 CHD6Q8TD26 2715 aa5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 ANKRD11Q6UB99 2663 aaPredicted RBP5.65□□□□□ -1.5
SRGAP1-202ENST00000537556 WNK1Q9H4A3 2382 aa5.65□□□□□ -1.51
SRGAP1-202ENST00000537556 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.64□□□□□ -1.513e-23■■■■■ 86
SRGAP1-202ENST00000537556 SPTA1P02549 2419 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 LINC00528Q8N1L1 170 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 C16orf74Q96GX8 76 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 C10orf99Q6UWK7 81 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 CHCHD10Q8WYQ3 142 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-202ENST00000537556 K7EQZ3 153 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 DSCR10P59022 87 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 UNQ6190/PRO20217Q6UXQ8 127 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 CASC2Q6XLA1 102 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 DSCR9P59020 149 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 LINC00313P59037 77 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 LAMA5O15230 3695 aa5.63□□□□□ -1.51
SRGAP1-202ENST00000537556 CR1P17927 2039 aa5.62□□□□□ -1.51
SRGAP1-202ENST00000537556 ACACAQ13085 2346 aa5.62□□□□□ -1.51
SRGAP1-202ENST00000537556 MDFIQ99750 246 aa5.61□□□□□ -1.51
SRGAP1-202ENST00000537556 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
SRGAP1-202ENST00000537556 CYSRT1A8MQ03 144 aa5.61□□□□□ -1.51
SRGAP1-202ENST00000537556 COA5Q86WW8 74 aa5.61□□□□□ -1.51
SRGAP1-202ENST00000537556 SLURP1P55000 103 aa5.61□□□□□ -1.51
SRGAP1-202ENST00000537556 ASH1LQ9NR48 2969 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-202ENST00000537556 GVQW2A0A096LPI5 108 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-202ENST00000537556 IGSF10Q6WRI0 2623 aa5.6□□□□□ -1.51
SRGAP1-202ENST00000537556 IGLV10-54A0A075B6I4 117 aa5.6□□□□□ -1.51
SRGAP1-202ENST00000537556 Q8NBF4 154 aa5.6□□□□□ -1.51
SRGAP1-202ENST00000537556 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-202ENST00000537556 A0A1W2PNM2 257 aa5.59□□□□□ -1.51
SRGAP1-202ENST00000537556 ODF3L2Q3SX64 289 aa5.59□□□□□ -1.51
SRGAP1-202ENST00000537556 REG3AQ06141 175 aa5.59□□□□□ -1.51
SRGAP1-202ENST00000537556 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.51
SRGAP1-202ENST00000537556 H0Y9P7 68 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 DEFB105AQ8NG35 78 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 COL12A1Q99715 3063 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 ATMQ13315 3056 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 GYPEP15421 78 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 Q8N377 158 aa5.58□□□□□ -1.52
SRGAP1-202ENST00000537556 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-202ENST00000537556 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
SRGAP1-202ENST00000537556 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SRGAP1-202ENST00000537556 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 IGKV2D-24A0A075B6R9 120 aa5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 DEFB136Q30KP8 78 aa5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 MAP1AP78559 2803 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-202ENST00000537556 CNBPP62633 177 aaKnown RBP5.55□□□□□ -1.52
SRGAP1-202ENST00000537556 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms