RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
CHFR-213ENST00000536843 MIFP14174 115 aa10.73□□□□□ -0.69
CHFR-213ENST00000536843 Q8N3U1 123 aa10.73□□□□□ -0.69
CHFR-213ENST00000536843 BRK1Q8WUW1 75 aa10.73□□□□□ -0.69
CHFR-213ENST00000536843 C9orf66Q5T8R8 295 aa10.73□□□□□ -0.69
CHFR-213ENST00000536843 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 PDE6GP18545 87 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 C6orf99Q4VX62 202 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 TRBV6-8A0A0A6YYG3 113 aa10.72□□□□□ -0.69
CHFR-213ENST00000536843 NOTCH2Q04721 2471 aa10.71□□□□□ -0.69
CHFR-213ENST00000536843 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
CHFR-213ENST00000536843 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.69
CHFR-213ENST00000536843 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
CHFR-213ENST00000536843 GIG44P09565 113 aaPredicted RBP10.7□□□□□ -0.7
CHFR-213ENST00000536843 V9GYY9 64 aa10.7□□□□□ -0.7
CHFR-213ENST00000536843 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
CHFR-213ENST00000536843 COX17Q14061 63 aa10.69□□□□□ -0.7
CHFR-213ENST00000536843 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
CHFR-213ENST00000536843 MTORP42345 2549 aa10.69□□□□□ -0.7
CHFR-213ENST00000536843 NIPBLQ6KC79 2804 aaeCLIP10.68□□□□□ -0.7
CHFR-213ENST00000536843 NREPQ16612 68 aa10.67□□□□□ -0.7
CHFR-213ENST00000536843 TMEM254Q8TBM7 123 aa10.67□□□□□ -0.7
CHFR-213ENST00000536843 H3BQ85 93 aa10.67□□□□□ -0.7
CHFR-213ENST00000536843 SMR3AQ99954 134 aa10.67□□□□□ -0.7
CHFR-213ENST00000536843 IGLV1-51P01701 117 aa10.66□□□□□ -0.7
CHFR-213ENST00000536843 SEC61GP60059 68 aa10.66□□□□□ -0.7
CHFR-213ENST00000536843 C19orf73Q9NVV2 129 aa10.66□□□□□ -0.7
CHFR-213ENST00000536843 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
CHFR-213ENST00000536843 JMJD1CQ15652 2540 aa10.65□□□□□ -0.7
CHFR-213ENST00000536843 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
CHFR-213ENST00000536843 A0A0U1RQV1 116 aa10.65□□□□□ -0.7
CHFR-213ENST00000536843 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.71
CHFR-213ENST00000536843 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.71
CHFR-213ENST00000536843 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.71
CHFR-213ENST00000536843 OTOGQ6ZRI0 2925 aa10.65□□□□□ -0.71
CHFR-213ENST00000536843 MUC7Q8TAX7 377 aa10.64□□□□□ -0.71
CHFR-213ENST00000536843 PLAC8L1A1L4L8 177 aa10.64□□□□□ -0.71
CHFR-213ENST00000536843 Q8NDZ9 215 aa10.63□□□□□ -0.71
CHFR-213ENST00000536843 TRGV4A0A0C4DH28 118 aa10.63□□□□□ -0.71
CHFR-213ENST00000536843 SPATA3Q8NHX4 192 aa10.63□□□□□ -0.71
CHFR-213ENST00000536843 BPY2O14599 106 aa10.62□□□□□ -0.71
CHFR-213ENST00000536843 KIAA0087Q14695 138 aa10.62□□□□□ -0.71
CHFR-213ENST00000536843 C16orf74Q96GX8 76 aa10.62□□□□□ -0.71
CHFR-213ENST00000536843 HIVEP2P31629 2446 aa10.62□□□□□ -0.71
CHFR-213ENST00000536843 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
CHFR-213ENST00000536843 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
CHFR-213ENST00000536843 KRTAP10-3P60369 221 aa10.6□□□□□ -0.71
CHFR-213ENST00000536843 Q6ZQY7 126 aa10.6□□□□□ -0.71
CHFR-213ENST00000536843 ESRGQ1W209 222 aa10.6□□□□□ -0.71
CHFR-213ENST00000536843 MPLKIPQ8TAP9 179 aa10.6□□□□□ -0.71
CHFR-213ENST00000536843 SCXQ7RTU7 201 aa10.59□□□□□ -0.71
CHFR-213ENST00000536843 A0A1B0GUV1 79 aa10.59□□□□□ -0.71
CHFR-213ENST00000536843 PRYO14603 147 aa10.59□□□□□ -0.71
CHFR-213ENST00000536843 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
CHFR-213ENST00000536843 IGLV6-57P01721 117 aa10.57□□□□□ -0.72
CHFR-213ENST00000536843 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
CHFR-213ENST00000536843 Q6ZTC4 211 aa10.56□□□□□ -0.72
CHFR-213ENST00000536843 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
CHFR-213ENST00000536843 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
CHFR-213ENST00000536843 FUSP35637 526 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHFR-213ENST00000536843 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
CHFR-213ENST00000536843 CD164L2Q6UWJ8 174 aa10.54□□□□□ -0.72
CHFR-213ENST00000536843 HIVEP1P15822 2718 aa10.53□□□□□ -0.72
CHFR-213ENST00000536843 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
CHFR-213ENST00000536843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.53□□□□□ -0.72
CHFR-213ENST00000536843 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
CHFR-213ENST00000536843 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
CHFR-213ENST00000536843 PRR15Q8IV56 129 aa10.51□□□□□ -0.73
CHFR-213ENST00000536843 COX7BP24311 80 aa10.5□□□□□ -0.73
CHFR-213ENST00000536843 NSD1Q96L73 2696 aaPredicted RBP10.5□□□□□ -0.73
CHFR-213ENST00000536843 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
CHFR-213ENST00000536843 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
CHFR-213ENST00000536843 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
CHFR-213ENST00000536843 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
CHFR-213ENST00000536843 Q8N9L7 120 aa10.47□□□□□ -0.73
CHFR-213ENST00000536843 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
CHFR-213ENST00000536843 GYPEP15421 78 aa10.46□□□□□ -0.73
CHFR-213ENST00000536843 HIGD2AQ9BW72 106 aa10.46□□□□□ -0.73
CHFR-213ENST00000536843 hDV103S1A0JD37 113 aa10.46□□□□□ -0.74
CHFR-213ENST00000536843 Q6ZRU5 148 aa10.46□□□□□ -0.74
CHFR-213ENST00000536843 FN1P02751 2386 aaKnown RBP10.45□□□□□ -0.74
CHFR-213ENST00000536843 A0A0J9YWU9 116 aa10.45□□□□□ -0.74
CHFR-213ENST00000536843 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
CHFR-213ENST00000536843 Q1T7F1 81 aa10.45□□□□□ -0.74
CHFR-213ENST00000536843 X6R8D5 127 aa10.45□□□□□ -0.74
CHFR-213ENST00000536843 C10orf25Q5T742 122 aa10.44□□□□□ -0.74
CHFR-213ENST00000536843 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
CHFR-213ENST00000536843 UNQ6190/PRO20217Q6UXQ8 127 aa10.44□□□□□ -0.74
CHFR-213ENST00000536843 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
CHFR-213ENST00000536843 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
CHFR-213ENST00000536843 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
CHFR-213ENST00000536843 CELA1Q9UNI1 258 aa10.42□□□□□ -0.74
CHFR-213ENST00000536843 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
CHFR-213ENST00000536843 LCE6AA0A183 80 aa10.42□□□□□ -0.74
CHFR-213ENST00000536843 F8P00451 2351 aa10.41□□□□□ -0.74
CHFR-213ENST00000536843 REG3AQ06141 175 aa10.41□□□□□ -0.74
CHFR-213ENST00000536843 SPAG11BQ08648 103 aa10.41□□□□□ -0.74
CHFR-213ENST00000536843 Q6ZRP5 223 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms