RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
CDCA3-204ENST00000535406 PRYO14603 147 aa5.72□□□□□ -1.49
CDCA3-204ENST00000535406 SLC7A5P1Q8MH63 180 aa5.72□□□□□ -1.49
CDCA3-204ENST00000535406 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
CDCA3-204ENST00000535406 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.5
CDCA3-204ENST00000535406 ZNF861PO60384 105 aa5.71□□□□□ -1.5
CDCA3-204ENST00000535406 COX17Q14061 63 aa5.71□□□□□ -1.5
CDCA3-204ENST00000535406 FAM19A2Q8N3H0 131 aa5.71□□□□□ -1.5
CDCA3-204ENST00000535406 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-204ENST00000535406 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
CDCA3-204ENST00000535406 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
CDCA3-204ENST00000535406 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
CDCA3-204ENST00000535406 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
CDCA3-204ENST00000535406 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
CDCA3-204ENST00000535406 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
CDCA3-204ENST00000535406 TMEM223A0PJW6 202 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 H0Y8G0 127 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 BCE1O60756 84 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 SERF1AO75920 110 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
CDCA3-204ENST00000535406 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
CDCA3-204ENST00000535406 RPL28P46779 137 aaKnown RBP5.68□□□□□ -1.5
CDCA3-204ENST00000535406 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
CDCA3-204ENST00000535406 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
CDCA3-204ENST00000535406 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
CDCA3-204ENST00000535406 SCO1O75880 301 aa5.67□□□□□ -1.5
CDCA3-204ENST00000535406 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
CDCA3-204ENST00000535406 VPREB1P12018 145 aa5.67□□□□□ -1.5
CDCA3-204ENST00000535406 RPL24P83731 157 aaKnown RBP5.67□□□□□ -1.5
CDCA3-204ENST00000535406 COLCA2A8K830 154 aa5.66□□□□□ -1.5
CDCA3-204ENST00000535406 RPL13AP40429 203 aaKnown RBP5.66□□□□□ -1.5
CDCA3-204ENST00000535406 UBE2AP49459 152 aa5.66□□□□□ -1.5
CDCA3-204ENST00000535406 LINC00158P58513 81 aa5.66□□□□□ -1.5
CDCA3-204ENST00000535406 HSPB8Q9UJY1 196 aa5.66□□□□□ -1.5
CDCA3-204ENST00000535406 A0A0U1RRA0 63 aa5.65□□□□□ -1.51
CDCA3-204ENST00000535406 PLNP26678 52 aa5.65□□□□□ -1.51
CDCA3-204ENST00000535406 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.51
CDCA3-204ENST00000535406 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
CDCA3-204ENST00000535406 FABP4P15090 132 aa5.64□□□□□ -1.51
CDCA3-204ENST00000535406 HERV-K104P63124 156 aa5.64□□□□□ -1.51
CDCA3-204ENST00000535406 Q8NDZ9 215 aa5.64□□□□□ -1.51
CDCA3-204ENST00000535406 NDUFA12Q9UI09 145 aa5.64□□□□□ -1.51
CDCA3-204ENST00000535406 LRP2P98164 4655 aa5.63□□□□□ -1.51
CDCA3-204ENST00000535406 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
CDCA3-204ENST00000535406 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
CDCA3-204ENST00000535406 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
CDCA3-204ENST00000535406 TMEM126AQ9H061 195 aa5.63□□□□□ -1.51
CDCA3-204ENST00000535406 LINC00587B1AMM8 73 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 TMEM238C9JI98 176 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 DPM2O94777 84 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 HERVK_113P61574 105 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 PRLHP81277 87 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 FAM19A1Q7Z5A9 133 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 MIR7-3HGQ8N6C7 128 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
CDCA3-204ENST00000535406 M0R378 163 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 LEPROTO15243 131 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 IGKCP01834 107 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 TSPEAR-AS2P59090 65 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 BOD1L2Q8IYS8 172 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 MAP1LC3CQ9BXW4 147 aa5.61□□□□□ -1.51
CDCA3-204ENST00000535406 A0A087X002 238 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 J3QQQ9 107 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BKO60814 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BJP06899 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 CRYGAP11844 174 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BOP23527 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BBP33778 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BDP58876 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BCP62807 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST2H2BEQ16778 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BHQ93079 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BNQ99877 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 HIST1H2BMQ99879 126 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
CDCA3-204ENST00000535406 NCR3O14931 201 aa5.59□□□□□ -1.51
CDCA3-204ENST00000535406 LGALS3P17931 250 aaKnown RBP5.59□□□□□ -1.51
CDCA3-204ENST00000535406 NMUP48645 174 aa5.59□□□□□ -1.51
CDCA3-204ENST00000535406 TYMSOSQ8TAI1 123 aa5.59□□□□□ -1.51
CDCA3-204ENST00000535406 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
CDCA3-204ENST00000535406 ANAPC11Q9NYG5 84 aa5.58□□□□□ -1.52
CDCA3-204ENST00000535406 FAM229BQ4G0N7 80 aa5.57□□□□□ -1.52
CDCA3-204ENST00000535406 DAND5Q8N907 189 aa5.57□□□□□ -1.52
CDCA3-204ENST00000535406 MIEN1Q9BRT3 115 aa5.57□□□□□ -1.52
CDCA3-204ENST00000535406 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
CDCA3-204ENST00000535406 SYS1-DBNDD2H3BUS1 97 aa5.56□□□□□ -1.52
CDCA3-204ENST00000535406 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
CDCA3-204ENST00000535406 TRBV10-3A0A0K0K1G6 114 aa5.55□□□□□ -1.52
CDCA3-204ENST00000535406 E9PLD3 99 aa5.55□□□□□ -1.52
CDCA3-204ENST00000535406 S100A12P80511 92 aa5.55□□□□□ -1.52
CDCA3-204ENST00000535406 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
CDCA3-204ENST00000535406 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 ETDCA0A1B0GVM5 59 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 TSPAN13O95857 204 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 SPRR1AP35321 89 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 PRR4Q16378 134 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms