RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	SFTA2	Q6UW10	78 aa		14.03	□□□□□ -0.16
RELA-223	ENST00000534283	RETNLB	Q9BQ08	111 aa		14.03	□□□□□ -0.16
RELA-223	ENST00000534283	IGKV2D-26	A0A0A0MRZ7	120 aa		14.02	□□□□□ -0.17
RELA-223	ENST00000534283	CTAG1A	P78358	180 aa		14	□□□□□ -0.17
RELA-223	ENST00000534283	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.99	□□□□□ -0.17
RELA-223	ENST00000534283	MUC17	Q685J3	4493 aa		13.99	□□□□□ -0.17
RELA-223	ENST00000534283	TMEM223	A0PJW6	202 aa		13.98	□□□□□ -0.17
RELA-223	ENST00000534283	CBLN2	Q8IUK8	224 aa		13.98	□□□□□ -0.17
RELA-223	ENST00000534283	LINC00158	P58513	81 aa		13.97	□□□□□ -0.17
RELA-223	ENST00000534283	C3orf22	Q8N5N4	141 aa		13.97	□□□□□ -0.17
RELA-223	ENST00000534283	FAT4	Q6V0I7	4981 aa		13.96	□□□□□ -0.17
RELA-223	ENST00000534283	TRAV12-1	A0A0B4J245	112 aa		13.95	□□□□□ -0.18
RELA-223	ENST00000534283		A0A0U1RQV1	116 aa		13.94	□□□□□ -0.18
RELA-223	ENST00000534283	TPRXL	Q17RH7	258 aa		13.94	□□□□□ -0.18
RELA-223	ENST00000534283	YPEL4	Q96NS1	127 aa		13.94	□□□□□ -0.18
RELA-223	ENST00000534283	HIGD2A	Q9BW72	106 aa		13.93	□□□□□ -0.18
RELA-223	ENST00000534283	IGLV7-46	A0A075B6I9	117 aa		13.92	□□□□□ -0.18
RELA-223	ENST00000534283		A0A0U1RRA0	63 aa		13.92	□□□□□ -0.18
RELA-223	ENST00000534283	APOC3	P02656	99 aa		13.92	□□□□□ -0.18
RELA-223	ENST00000534283	IFI27L1	Q96BM0	104 aa		13.92	□□□□□ -0.18
RELA-223	ENST00000534283	SPRR4	Q96PI1	79 aa		13.92	□□□□□ -0.18
RELA-223	ENST00000534283	CHCHD1	Q96BP2	118 aa	Known RBP	13.91	□□□□□ -0.18
RELA-223	ENST00000534283	SMIM13	P0DJ93	91 aa		13.9	□□□□□ -0.18
RELA-223	ENST00000534283	LCE2A	Q5TA79	106 aa	Predicted RBP	13.89	□□□□□ -0.19
RELA-223	ENST00000534283	SNAPIN	O95295	136 aa		13.88	□□□□□ -0.19
RELA-223	ENST00000534283	SPRR1A	P35321	89 aa		13.88	□□□□□ -0.19
RELA-223	ENST00000534283	SVBP	Q8N300	66 aa		13.88	□□□□□ -0.19
RELA-223	ENST00000534283	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.86	□□□□□ -0.19
RELA-223	ENST00000534283	SPAG11A	Q6PDA7	123 aa		13.86	□□□□□ -0.19
RELA-223	ENST00000534283	BOD1L2	Q8IYS8	172 aa		13.86	□□□□□ -0.19
RELA-223	ENST00000534283	CDIP1	Q9H305	208 aa		13.86	□□□□□ -0.19
RELA-223	ENST00000534283	KCNQ1DN	Q9H478	68 aa		13.86	□□□□□ -0.19
RELA-223	ENST00000534283	PRY	O14603	147 aa		13.85	□□□□□ -0.19
RELA-223	ENST00000534283	MIR7-3HG	Q8N6C7	128 aa		13.85	□□□□□ -0.19
RELA-223	ENST00000534283	LINC00337	Q8N6G1	96 aa		13.84	□□□□□ -0.19
RELA-223	ENST00000534283	HERV-K104	P63124	156 aa		13.83	□□□□□ -0.2
RELA-223	ENST00000534283	NDUFA5	Q16718	116 aa		13.82	□□□□□ -0.2
RELA-223	ENST00000534283	PPDPF	Q9H3Y8	114 aa		13.82	□□□□□ -0.2
RELA-223	ENST00000534283	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.82	□□□□□ -0.2
RELA-223	ENST00000534283	NCR3	O14931	201 aa		13.81	□□□□□ -0.2
RELA-223	ENST00000534283	ATP6V1G1	O75348	118 aa		13.81	□□□□□ -0.2
RELA-223	ENST00000534283	MEIG1	Q5JSS6	88 aa		13.81	□□□□□ -0.2
RELA-223	ENST00000534283	SMCR5	Q8TEV8	140 aa		13.81	□□□□□ -0.2
RELA-223	ENST00000534283	NDUFA12	Q9UI09	145 aa		13.81	□□□□□ -0.2
RELA-223	ENST00000534283	FAM19A2	Q8N3H0	131 aa		13.8	□□□□□ -0.2
RELA-223	ENST00000534283	TRBV10-3	A0A0K0K1G6	114 aa		13.78	□□□□□ -0.2
RELA-223	ENST00000534283	LINC00587	B1AMM8	73 aa		13.77	□□□□□ -0.21
RELA-223	ENST00000534283	DAND5	Q8N907	189 aa		13.77	□□□□□ -0.21
RELA-223	ENST00000534283	LOC107984156	A0A0G2JMH3	177 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283	MYMX	A0A1B0GTQ4	84 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283	TSPEAR-AS2	P59090	65 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283	LINC00483	Q53H64	154 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283	FP248	Q71RG6	208 aa	Predicted RBP	13.76	□□□□□ -0.21
RELA-223	ENST00000534283	ARL17A	Q8IVW1	177 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283		Q8NBF4	154 aa		13.76	□□□□□ -0.21
RELA-223	ENST00000534283	HSBP1	O75506	76 aa		13.75	□□□□□ -0.21
RELA-223	ENST00000534283	KRTAP9-2	Q9BYQ4	174 aa		13.75	□□□□□ -0.21
RELA-223	ENST00000534283	ETDC	A0A1B0GVM5	59 aa		13.74	□□□□□ -0.21
RELA-223	ENST00000534283	LINC00310	P59036	64 aa		13.73	□□□□□ -0.21
RELA-223	ENST00000534283	C4orf48	Q5BLP8	95 aa		13.73	□□□□□ -0.21
RELA-223	ENST00000534283		B5MCH6	92 aa		13.72	□□□□□ -0.21
RELA-223	ENST00000534283	MAP1LC3C	Q9BXW4	147 aa		13.72	□□□□□ -0.21
RELA-223	ENST00000534283	LEPROT	O15243	131 aa		13.71	□□□□□ -0.21
RELA-223	ENST00000534283	KRTAP13-3	Q3SY46	172 aa		13.71	□□□□□ -0.21
RELA-223	ENST00000534283	ERC2-IT1	O76042	136 aa		13.7	□□□□□ -0.22
RELA-223	ENST00000534283		H0Y8G0	127 aa		13.69	□□□□□ -0.22
RELA-223	ENST00000534283	SPINK1	P00995	79 aa		13.69	□□□□□ -0.22
RELA-223	ENST00000534283	TRBV10-2	A0A0K0K1G8	114 aa		13.68	□□□□□ -0.22
RELA-223	ENST00000534283	TRGC2	P03986	189 aa		13.68	□□□□□ -0.22
RELA-223	ENST00000534283	LEPROTL1	O95214	131 aa		13.67	□□□□□ -0.22
RELA-223	ENST00000534283	GAGE2A	Q6NT46	116 aa		13.67	□□□□□ -0.22
RELA-223	ENST00000534283	SERF1A	O75920	110 aa		13.66	□□□□□ -0.22
RELA-223	ENST00000534283		Q9BRP9	147 aa		13.66	□□□□□ -0.22
RELA-223	ENST00000534283		J3QQQ9	107 aa		13.65	□□□□□ -0.22
RELA-223	ENST00000534283	PLN	P26678	52 aa		13.65	□□□□□ -0.22
RELA-223	ENST00000534283	DDT	P30046	118 aa		13.65	□□□□□ -0.22
RELA-223	ENST00000534283	S100A12	P80511	92 aa		13.63	□□□□□ -0.23
RELA-223	ENST00000534283	IGLV6-57	P01721	117 aa		13.62	□□□□□ -0.23
RELA-223	ENST00000534283		Q6ZRX8	168 aa		13.62	□□□□□ -0.23
RELA-223	ENST00000534283	SSBP3-AS1	Q7Z2R9	100 aa		13.62	□□□□□ -0.23
RELA-223	ENST00000534283	DPM2	O94777	84 aa		13.61	□□□□□ -0.23
RELA-223	ENST00000534283	MOBP	Q13875	183 aa		13.61	□□□□□ -0.23
RELA-223	ENST00000534283	ASB16-AS1	Q495Z4	193 aa		13.61	□□□□□ -0.23
RELA-223	ENST00000534283	PMCHL2	Q9BQD1	86 aa		13.61	□□□□□ -0.23
RELA-223	ENST00000534283	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.61	□□□□□ -0.23
RELA-223	ENST00000534283	NDUFC2	O95298	119 aa		13.6	□□□□□ -0.23
RELA-223	ENST00000534283	NMU	P48645	174 aa		13.6	□□□□□ -0.23
RELA-223	ENST00000534283	RPS29	P62273	56 aa	Known RBP	13.59	□□□□□ -0.23
RELA-223	ENST00000534283		Q8N377	158 aa		13.59	□□□□□ -0.23
RELA-223	ENST00000534283	HSPB8	Q9UJY1	196 aa		13.59	□□□□□ -0.23
RELA-223	ENST00000534283	IGLV9-49	A0A0B4J1Y8	123 aa		13.58	□□□□□ -0.24
RELA-223	ENST00000534283	EIF4EBP3	O60516	100 aa	Predicted RBP	13.58	□□□□□ -0.24
RELA-223	ENST00000534283	FABP4	P15090	132 aa		13.58	□□□□□ -0.24
RELA-223	ENST00000534283	SOSTDC1	Q6X4U4	206 aa		13.58	□□□□□ -0.24
RELA-223	ENST00000534283	IGKC	P01834	107 aa		13.57	□□□□□ -0.24
RELA-223	ENST00000534283	HERVK_113	P61574	105 aa		13.57	□□□□□ -0.24
RELA-223	ENST00000534283	LGALS3	P17931	250 aa	Known RBP	13.56	□□□□□ -0.24
RELA-223	ENST00000534283	ADAMTSL4-AS1	Q5T5F5	129 aa		13.56	□□□□□ -0.24
RELA-223	ENST00000534283	KRTAP4-1	Q9BYQ7	146 aa		13.56	□□□□□ -0.24
RELA-223	ENST00000534283	MIEN1	Q9BRT3	115 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms