RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NDUFC2-KCTD14E9PQ53 114 aa13.31□□□□□ -0.28
CAPN1-226ENST00000533820 ANGP03950 147 aaKnown RBP13.31□□□□□ -0.28
CAPN1-226ENST00000533820 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
CAPN1-226ENST00000533820 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
CAPN1-226ENST00000533820 SMIM26A0A096LP01 95 aa13.3□□□□□ -0.28
CAPN1-226ENST00000533820 H7BZZ5 65 aa13.3□□□□□ -0.28
CAPN1-226ENST00000533820 HTN3P15516 51 aa13.29□□□□□ -0.28
CAPN1-226ENST00000533820 KRTAP10-3P60369 221 aa13.29□□□□□ -0.28
CAPN1-226ENST00000533820 RBM3P98179 157 aaKnown RBP13.29□□□□□ -0.28
CAPN1-226ENST00000533820 PRO0255Q9UI72 69 aa13.29□□□□□ -0.28
CAPN1-226ENST00000533820 MPLKIPQ8TAP9 179 aa13.28□□□□□ -0.28
CAPN1-226ENST00000533820 ORMDL1Q9P0S3 153 aa13.28□□□□□ -0.28
CAPN1-226ENST00000533820 X6R8D5 127 aa13.28□□□□□ -0.28
CAPN1-226ENST00000533820 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
CAPN1-226ENST00000533820 CHCHD10Q8WYQ3 142 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-226ENST00000533820 EPM2AB3EWF7 344 aa13.26□□□□□ -0.29
CAPN1-226ENST00000533820 Q8IZM0 81 aa13.26□□□□□ -0.29
CAPN1-226ENST00000533820 RMI2Q96E14 147 aa13.26□□□□□ -0.29
CAPN1-226ENST00000533820 ANK3Q12955 4377 aaKnown RBP13.25□□□□□ -0.29
CAPN1-226ENST00000533820 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
CAPN1-226ENST00000533820 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
CAPN1-226ENST00000533820 Q8NDZ9 215 aa13.24□□□□□ -0.29
CAPN1-226ENST00000533820 A0A1B0GUV1 79 aa13.23□□□□□ -0.29
CAPN1-226ENST00000533820 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
CAPN1-226ENST00000533820 F8WEM9 126 aa13.23□□□□□ -0.29
CAPN1-226ENST00000533820 REG3AQ06141 175 aa13.23□□□□□ -0.29
CAPN1-226ENST00000533820 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
CAPN1-226ENST00000533820 KIAA0087Q14695 138 aa13.22□□□□□ -0.29
CAPN1-226ENST00000533820 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
CAPN1-226ENST00000533820 LY6G6DO95868 133 aa13.21□□□□□ -0.29
CAPN1-226ENST00000533820 C10orf25Q5T742 122 aa13.21□□□□□ -0.29
CAPN1-226ENST00000533820 OTOGQ6ZRI0 2925 aa13.21□□□□□ -0.3
CAPN1-226ENST00000533820 Q8N814 137 aa13.2□□□□□ -0.3
CAPN1-226ENST00000533820 OBSCN-AS1Q96MR7 158 aa13.2□□□□□ -0.3
CAPN1-226ENST00000533820 CD164L2Q6UWJ8 174 aa13.2□□□□□ -0.3
CAPN1-226ENST00000533820 UNQ6190/PRO20217Q6UXQ8 127 aa13.2□□□□□ -0.3
CAPN1-226ENST00000533820 S100A7L2Q5SY68 101 aa13.19□□□□□ -0.3
CAPN1-226ENST00000533820 LINC00612Q8N6U2 182 aa13.19□□□□□ -0.3
CAPN1-226ENST00000533820 HIVEP1P15822 2718 aa13.19□□□□□ -0.3
CAPN1-226ENST00000533820 CCKP06307 115 aa13.19□□□□□ -0.3
CAPN1-226ENST00000533820 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
CAPN1-226ENST00000533820 DAD1P61803 113 aa13.18□□□□□ -0.3
CAPN1-226ENST00000533820 IGHV4-28A0A0C4DH34 117 aa13.16□□□□□ -0.3
CAPN1-226ENST00000533820 RETNQ9HD89 108 aa13.16□□□□□ -0.3
CAPN1-226ENST00000533820 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
CAPN1-226ENST00000533820 KLK12Q9UKR0 248 aa13.15□□□□□ -0.3
CAPN1-226ENST00000533820 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.3
CAPN1-226ENST00000533820 FAM229BQ4G0N7 80 aa13.14□□□□□ -0.31
CAPN1-226ENST00000533820 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
CAPN1-226ENST00000533820 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
CAPN1-226ENST00000533820 TMEM256-PLSCR3K7ERE1 68 aa13.11□□□□□ -0.31
CAPN1-226ENST00000533820 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
CAPN1-226ENST00000533820 LAMTOR3Q9UHA4 124 aa13.1□□□□□ -0.31
CAPN1-226ENST00000533820 NSD1Q96L73 2696 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-226ENST00000533820 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
CAPN1-226ENST00000533820 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
CAPN1-226ENST00000533820 PMAIP1Q13794 54 aa13.09□□□□□ -0.31
CAPN1-226ENST00000533820 JMJD7-PLA2G4BH0Y9G9 81 aa13.08□□□□□ -0.32
CAPN1-226ENST00000533820 COX17Q14061 63 aa13.08□□□□□ -0.32
CAPN1-226ENST00000533820 TRAV7A0A075B6U4 112 aa13.07□□□□□ -0.32
CAPN1-226ENST00000533820 M0R2N4 97 aa13.07□□□□□ -0.32
CAPN1-226ENST00000533820 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
CAPN1-226ENST00000533820 LINC00575Q6W349 94 aa13.05□□□□□ -0.32
CAPN1-226ENST00000533820 KLKP1Q107X0 134 aa13.04□□□□□ -0.32
CAPN1-226ENST00000533820 Q6ZQY7 126 aa13.04□□□□□ -0.32
CAPN1-226ENST00000533820 HIGD2BQ4VC39 106 aa13.03□□□□□ -0.32
CAPN1-226ENST00000533820 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
CAPN1-226ENST00000533820 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
CAPN1-226ENST00000533820 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
CAPN1-226ENST00000533820 APOC4P55056 127 aa13.01□□□□□ -0.33
CAPN1-226ENST00000533820 Q8NAQ8 132 aa13.01□□□□□ -0.33
CAPN1-226ENST00000533820 INAFM1C9JVW0 142 aa13.01□□□□□ -0.33
CAPN1-226ENST00000533820 HAMPP81172 84 aa13.01□□□□□ -0.33
CAPN1-226ENST00000533820 SPART-AS1P0CW21 52 aa12.99□□□□□ -0.33
CAPN1-226ENST00000533820 ATP5EP2Q5VTU8 51 aa12.99□□□□□ -0.33
CAPN1-226ENST00000533820 LELP1Q5T871 98 aa12.98□□□□□ -0.33
CAPN1-226ENST00000533820 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
CAPN1-226ENST00000533820 TM2D3Q9BRN9 247 aa12.97□□□□□ -0.33
CAPN1-226ENST00000533820 LRCOL1A6NCL2 159 aa12.97□□□□□ -0.33
CAPN1-226ENST00000533820 Q6ZQT0 140 aa12.96□□□□□ -0.34
CAPN1-226ENST00000533820 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 SCXQ7RTU7 201 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 TENM3Q9P273 2699 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 IGLV6-57P01721 117 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 WFDC10BQ8IUB3 73 aa12.94□□□□□ -0.34
CAPN1-226ENST00000533820 MIFP14174 115 aa12.93□□□□□ -0.34
CAPN1-226ENST00000533820 A0A0J9YWU9 116 aa12.93□□□□□ -0.34
CAPN1-226ENST00000533820 J3QKU1 62 aa12.92□□□□□ -0.34
CAPN1-226ENST00000533820 DIRC1Q969H9 104 aa12.91□□□□□ -0.34
CAPN1-226ENST00000533820 CAMK2N2Q96S95 79 aa12.91□□□□□ -0.34
CAPN1-226ENST00000533820 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
CAPN1-226ENST00000533820 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-226ENST00000533820 ZNF73O43830 326 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-226ENST00000533820 Q6ZVQ6 151 aa12.89□□□□□ -0.35
CAPN1-226ENST00000533820 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
CAPN1-226ENST00000533820 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-226ENST00000533820 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
CAPN1-226ENST00000533820 F8P00451 2351 aa12.87□□□□□ -0.35
CAPN1-226ENST00000533820 FLNBO75369 2602 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms