RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 GNGT2O14610 69 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 MPC2O95563 127 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 S100PP25815 95 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 H1FX-AS1Q4G0G2 97 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 TRGV9Q99603 122 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 RNF213Q63HN8 5207 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 PCNX1Q96RV3 2341 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 C5P01031 1676 aa-0.47□□□□□ -2.48
BRCA2-205ENST00000533776 CNOT1A5YKK6 2376 aaKnown RBP-0.47□□□□□ -2.49
BRCA2-205ENST00000533776 LRRC37AA6NMS7 1700 aa-0.47□□□□□ -2.49
BRCA2-205ENST00000533776 SAMD9Q5K651 1589 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 TRAV30A0A087WSZ9 112 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 ATP6V1G2-DDX39BF2Z307 99 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 H0Y9P7 68 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 USMG5Q96IX5 58 aa-0.48□□□□□ -2.49
BRCA2-205ENST00000533776 TMEM218A2RU14 115 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 LOC730098B7Z3J9 87 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 COX8AP10176 69 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 SPRR2AP35326 72 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 PSMG4Q5JS54 123 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 TEX14Q8IWB6 1497 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 RAPGEF2Q9Y4G8 1499 aa-0.49□□□□□ -2.49
BRCA2-205ENST00000533776 H3BQF6 201 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 SYS1-DBNDD2H3BUS1 97 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 NDUFC1O43677 76 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 ARMS2P0C7Q2 107 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 S100A10P60903 97 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 SERP2Q8N6R1 65 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 MRPL34Q9BQ48 92 aaKnown RBP-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 PMCHL2Q9BQD1 86 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 SETD2Q9BYW2 2564 aaPredicted RBP-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 TGP01266 2768 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 CNTLNQ9NXG0 1405 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 ANKRD26Q9UPS8 1709 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 CRYBG1Q9Y4K1 1723 aa-0.5□□□□□ -2.49
BRCA2-205ENST00000533776 SPRR2EP22531 72 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 RBP2P50120 134 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 PMCHL1Q16048 86 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 UBR1Q8IWV7 1749 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 FYCO1Q9BQS8 1478 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 PSENENQ9NZ42 101 aa-0.51□□□□□ -2.49
BRCA2-205ENST00000533776 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 QSER1Q2KHR3 1735 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 PTPN23Q9H3S7 1636 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 ADAMTS12P58397 1594 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 ABCC10Q5T3U5 1492 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 DNAH6Q9C0G6 4158 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 TRBV7-7A0A0K0K1E9 115 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 ATOX1O00244 68 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 NCMAPQ5T1S8 102 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 STARD9Q9P2P6 4700 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 RGPD1P0DJD0 1748 aa-0.52□□□□□ -2.49
BRCA2-205ENST00000533776 ABCC2Q92887 1545 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 CCDC141Q6ZP82 1450 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 CUBNO60494 3623 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 AKAP13Q12802 2813 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 MYH4Q9Y623 1939 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 UQCRHP07919 91 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 DEFB135Q30KP9 77 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 TCEAL7Q9BRU2 100 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 VAMP8Q9BV40 100 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 HIGD1BQ9P298 99 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 COL14A1Q05707 1796 aaKnown RBP-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 CLTCQ00610 1675 aaKnown RBP-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 ALKQ9UM73 1620 aa-0.53□□□□□ -2.49
BRCA2-205ENST00000533776 KNL1Q8NG31 2342 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 BCORQ6W2J9 1755 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 F8WEM9 126 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 I3L3M4 83 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 IGLC2P0DOY2 106 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 IGLC3P0DOY3 106 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 DEFB112Q30KQ8 113 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 KRTAP19-8Q3LI54 63 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 KRTAP20-2Q3LI61 65 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 C9orf62Q8N4C0 152 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 ACBD7Q8N6N7 88 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 RYR2Q92736 4967 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 CREBBPQ92793 2442 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 EPRSP07814 1512 aaKnown RBP-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 TNRC18O15417 2968 aaPredicted RBP-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 FANCAO15360 1455 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 KIF20BQ96Q89 1820 aa-0.54□□□□□ -2.5
BRCA2-205ENST00000533776 AKAP9Q99996 3911 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 VPS8Q8N3P4 1428 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 RGPD2P0DJD1 1756 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 GNGT1P63211 74 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 DPY30Q9C005 99 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 UBE2D4Q9Y2X8 147 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 AKAP12Q02952 1782 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 MAGI2Q86UL8 1455 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 TRANK1O15050 2925 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 PKD1L3Q7Z443 1732 aa-0.55□□□□□ -2.5
BRCA2-205ENST00000533776 VPS13BQ7Z7G8 4022 aa-0.56□□□□□ -2.5
BRCA2-205ENST00000533776 ETDBQ3ZM63 59 aa-0.56□□□□□ -2.5
BRCA2-205ENST00000533776 SNHG12Q9BXW3 62 aa-0.56□□□□□ -2.5
BRCA2-205ENST00000533776 PREX1Q8TCU6 1659 aa-0.56□□□□□ -2.5
BRCA2-205ENST00000533776 CICQ96RK0 1608 aaPredicted RBP-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms