RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CFAP161Q6P656 301 aa12.27□□□□□ -0.44
SMPD1-208ENST00000533123 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.44
SMPD1-208ENST00000533123 Q1RN00 199 aa12.27□□□□□ -0.45
SMPD1-208ENST00000533123 LINC01620Q4KN68 170 aa12.27□□□□□ -0.45
SMPD1-208ENST00000533123 C6orf223Q8N319 242 aa12.27□□□□□ -0.45
SMPD1-208ENST00000533123 LINC01600Q96MT4 127 aa12.27□□□□□ -0.45
SMPD1-208ENST00000533123 SPAG11BQ08648 103 aa12.26□□□□□ -0.45
SMPD1-208ENST00000533123 TRBV30A0A0K0K1B3 111 aa12.26□□□□□ -0.45
SMPD1-208ENST00000533123 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
SMPD1-208ENST00000533123 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
SMPD1-208ENST00000533123 TRIAP1O43715 76 aa12.25□□□□□ -0.45
SMPD1-208ENST00000533123 Q6ZR54 194 aa12.25□□□□□ -0.45
SMPD1-208ENST00000533123 RMI2Q96E14 147 aa12.25□□□□□ -0.45
SMPD1-208ENST00000533123 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
SMPD1-208ENST00000533123 ANAPC13Q9BS18 74 aa12.24□□□□□ -0.45
SMPD1-208ENST00000533123 DNAH2Q9P225 4427 aa12.24□□□□□ -0.45
SMPD1-208ENST00000533123 C9orf116Q5BN46 136 aaPredicted RBP12.23□□□□□ -0.45
SMPD1-208ENST00000533123 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
SMPD1-208ENST00000533123 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
SMPD1-208ENST00000533123 RPL13AP40429 203 aaKnown RBP12.22□□□□□ -0.45
SMPD1-208ENST00000533123 CXCL5P42830 114 aa12.22□□□□□ -0.45
SMPD1-208ENST00000533123 DNAH6Q9C0G6 4158 aa12.22□□□□□ -0.45
SMPD1-208ENST00000533123 TEX49A0A1B0GTD5 131 aa12.22□□□□□ -0.45
SMPD1-208ENST00000533123 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
SMPD1-208ENST00000533123 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.46
SMPD1-208ENST00000533123 COPS9Q8WXC6 57 aa12.21□□□□□ -0.46
SMPD1-208ENST00000533123 PSCAO43653 123 aa12.19□□□□□ -0.46
SMPD1-208ENST00000533123 SNCGO76070 127 aa12.19□□□□□ -0.46
SMPD1-208ENST00000533123 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
SMPD1-208ENST00000533123 LCE6AA0A183 80 aa12.18□□□□□ -0.46
SMPD1-208ENST00000533123 GAGE2BQ13066 116 aa12.18□□□□□ -0.46
SMPD1-208ENST00000533123 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
SMPD1-208ENST00000533123 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
SMPD1-208ENST00000533123 KMT2CQ8NEZ4 4911 aaKnown RBP12.18□□□□□ -0.46
SMPD1-208ENST00000533123 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-208ENST00000533123 SND1-IT1Q9HBX3 110 aa12.17□□□□□ -0.46
SMPD1-208ENST00000533123 LECT2O14960 151 aa12.17□□□□□ -0.46
SMPD1-208ENST00000533123 PPDPFQ9H3Y8 114 aa12.17□□□□□ -0.46
SMPD1-208ENST00000533123 NDUFV3P56181 108 aaKnown RBP12.15□□□□□ -0.46
SMPD1-208ENST00000533123 C1orf134Q5TEV5 83 aa12.15□□□□□ -0.46
SMPD1-208ENST00000533123 SVIPQ8NHG7 77 aa12.15□□□□□ -0.46
SMPD1-208ENST00000533123 COX17Q14061 63 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 H3BT86 120 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 ZNF561-AS1K7EIQ3 104 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 Q6Q795 121 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 C6orf48Q9UBA6 75 aa12.14□□□□□ -0.47
SMPD1-208ENST00000533123 COX6CP09669 75 aa12.13□□□□□ -0.47
SMPD1-208ENST00000533123 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
SMPD1-208ENST00000533123 LST1O00453 97 aa12.12□□□□□ -0.47
SMPD1-208ENST00000533123 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SMPD1-208ENST00000533123 CAMK2N2Q96S95 79 aa12.11□□□□□ -0.47
SMPD1-208ENST00000533123 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
SMPD1-208ENST00000533123 B5MCH6 92 aa12.1□□□□□ -0.47
SMPD1-208ENST00000533123 GVQW2A0A096LPI5 108 aaPredicted RBP12.09□□□□□ -0.47
SMPD1-208ENST00000533123 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
SMPD1-208ENST00000533123 Q6ZRU5 148 aa12.09□□□□□ -0.47
SMPD1-208ENST00000533123 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
SMPD1-208ENST00000533123 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
SMPD1-208ENST00000533123 FRAS1Q86XX4 4008 aa12.07□□□□□ -0.48
SMPD1-208ENST00000533123 Q8NDZ9 215 aa12.07□□□□□ -0.48
SMPD1-208ENST00000533123 TRAV13-2A0A0B4J235 113 aa12.06□□□□□ -0.48
SMPD1-208ENST00000533123 FAM240AA0A1B0GVK7 77 aa12.06□□□□□ -0.48
SMPD1-208ENST00000533123 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
SMPD1-208ENST00000533123 CCDC179H3BU77 68 aa12.06□□□□□ -0.48
SMPD1-208ENST00000533123 RTL8CO15255 209 aa12.05□□□□□ -0.48
SMPD1-208ENST00000533123 RYR2Q92736 4967 aa12.05□□□□□ -0.48
SMPD1-208ENST00000533123 SLPIP03973 132 aa12.03□□□□□ -0.48
SMPD1-208ENST00000533123 A0A087WTM6 91 aa12.03□□□□□ -0.48
SMPD1-208ENST00000533123 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
SMPD1-208ENST00000533123 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.02□□□□□ -0.48
SMPD1-208ENST00000533123 TNP2Q05952 138 aa12.02□□□□□ -0.49
SMPD1-208ENST00000533123 SYCNQ0VAF6 134 aa12.02□□□□□ -0.49
SMPD1-208ENST00000533123 OR13C6PQ8NH95 151 aa12.02□□□□□ -0.49
SMPD1-208ENST00000533123 NCR3O14931 201 aa12.01□□□□□ -0.49
SMPD1-208ENST00000533123 C14orf177Q52M58 125 aa12.01□□□□□ -0.49
SMPD1-208ENST00000533123 NDUFC2O95298 119 aa12□□□□□ -0.49
SMPD1-208ENST00000533123 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
SMPD1-208ENST00000533123 Q8N814 137 aa11.99□□□□□ -0.49
SMPD1-208ENST00000533123 SMIM11BQ8TCY0 68 aa11.99□□□□□ -0.49
SMPD1-208ENST00000533123 TRBV7-7A0A0K0K1E9 115 aa11.98□□□□□ -0.49
SMPD1-208ENST00000533123 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
SMPD1-208ENST00000533123 F8WDY8 70 aa11.97□□□□□ -0.49
SMPD1-208ENST00000533123 RPL28P46779 137 aaKnown RBP11.97□□□□□ -0.49
SMPD1-208ENST00000533123 Q6ZRP5 223 aa11.96□□□□□ -0.49
SMPD1-208ENST00000533123 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMPD1-208ENST00000533123 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
SMPD1-208ENST00000533123 HECTD4Q9Y4D8 3996 aa11.94□□□□□ -0.5
SMPD1-208ENST00000533123 ACYP1P07311 99 aa11.94□□□□□ -0.5
SMPD1-208ENST00000533123 RYR3Q15413 4870 aa11.93□□□□□ -0.5
SMPD1-208ENST00000533123 RPL18AQ02543 176 aaKnown RBP11.93□□□□□ -0.5
SMPD1-208ENST00000533123 FAM218AQ96MZ4 157 aa11.93□□□□□ -0.5
SMPD1-208ENST00000533123 DNAH11Q96DT5 4516 aa11.93□□□□□ -0.5
SMPD1-208ENST00000533123 TRACP01848 142 aa11.91□□□□□ -0.5
SMPD1-208ENST00000533123 TMEM126AQ9H061 195 aa11.91□□□□□ -0.5
SMPD1-208ENST00000533123 S100A7L2Q5SY68 101 aa11.9□□□□□ -0.5
SMPD1-208ENST00000533123 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
SMPD1-208ENST00000533123 SMCR5Q8TEV8 140 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms