RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 CCL18P55774 89 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 TMEM89A2RUT3 159 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 KLLNB2CW77 178 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 UBE2AP49459 152 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 SMIM1B2RUZ4 78 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 A6NED7 52 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 PROK1P58294 105 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 LINC00315P59091 139 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 C6orf99Q4VX62 202 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 LINC00337Q8N6G1 96 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 MDFIQ99750 246 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 TENM1Q9UKZ4 2725 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 Q6ZVQ6 151 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 VPS13CQ709C8 3753 aa4.86□□□□□ -1.63
TGFBR3-209ENST00000532540 PRM2P04554 102 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 PRR4Q16378 134 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 CR1P17927 2039 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 Q8N814 137 aa4.85□□□□□ -1.63
TGFBR3-209ENST00000532540 H3BUA1 57 aa4.84□□□□□ -1.64
TGFBR3-209ENST00000532540 COX6A2Q02221 97 aa4.84□□□□□ -1.64
TGFBR3-209ENST00000532540 TRAV10A0A0B4J240 114 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 TRBV6-4A0A1B0GX49 114 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 K7EQD1 137 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 NDUFS5O43920 106 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 CXCL6P80162 114 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 Q6ZQY7 126 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 K7EMT4 169 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 Q6ZTI0 123 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
TGFBR3-209ENST00000532540 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
TGFBR3-209ENST00000532540 NDUFB1O75438 58 aa4.82□□□□□ -1.64
TGFBR3-209ENST00000532540 DIRC1Q969H9 104 aa4.82□□□□□ -1.64
TGFBR3-209ENST00000532540 TM2D3Q9BRN9 247 aa4.82□□□□□ -1.64
TGFBR3-209ENST00000532540 ZNF469Q96JG9 3925 aaPredicted RBP4.82□□□□□ -1.64
TGFBR3-209ENST00000532540 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 FP248Q71RG6 208 aaPredicted RBP4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 A0A096LPF7 62 aa4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 NANOS2P60321 138 aaKnown RBP4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 SPATA3Q8NHX4 192 aa4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 CELA1Q9UNI1 258 aa4.81□□□□□ -1.64
TGFBR3-209ENST00000532540 FSHBP01225 129 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 MUC4Q99102 2169 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
TGFBR3-209ENST00000532540 COX7BP24311 80 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 DEFB114Q30KQ6 69 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 KRTAP10-3P60369 221 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 HIGD2AQ9BW72 106 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 VWFP04275 2813 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
TGFBR3-209ENST00000532540 K7EQG2 157 aa4.78□□□□□ -1.64
TGFBR3-209ENST00000532540 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
TGFBR3-209ENST00000532540 NOP10Q9NPE3 64 aaKnown RBP4.78□□□□□ -1.64
TGFBR3-209ENST00000532540 AKAP9Q99996 3911 aa4.78□□□□□ -1.64
TGFBR3-209ENST00000532540 ERC2-IT1O76042 136 aa4.78□□□□□ -1.65
TGFBR3-209ENST00000532540 ZNF575Q86XF7 245 aa4.78□□□□□ -1.65
TGFBR3-209ENST00000532540 C3orf84H3BNL1 204 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 LYPD5Q6UWN5 251 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 MUC7Q8TAX7 377 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 LINC00269Q8N2A0 174 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 C11orf72Q8NBR9 251 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 ANGP03950 147 aaKnown RBP4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 C4orf48Q5BLP8 95 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 DNHD1Q96M86 4753 aa4.77□□□□□ -1.65
TGFBR3-209ENST00000532540 Q6ZQT0 140 aa4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 IGKV2-28A0A075B6P5 120 aa4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 IGKV2D-28P01615 120 aa4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 PRR3P79522 188 aaKnown RBP4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.76□□□□□ -1.65
TGFBR3-209ENST00000532540 IGLV10-54A0A075B6I4 117 aa4.75□□□□□ -1.65
TGFBR3-209ENST00000532540 Q8N9L7 120 aa4.75□□□□□ -1.65
TGFBR3-209ENST00000532540 A8MUN3 132 aa4.75□□□□□ -1.65
TGFBR3-209ENST00000532540 LINC00575Q6W349 94 aa4.75□□□□□ -1.65
TGFBR3-209ENST00000532540 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 LOC110117498A0A087WWA1 95 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 NKAPP1Q8N9T2 125 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 ETDCA0A1B0GVM5 59 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 APOC4P55056 127 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
TGFBR3-209ENST00000532540 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms