RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 Q8TAT8 98 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 C10orf105Q8TEF2 133 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 RPL39LQ96EH5 51 aaKnown RBP1.8□□□□□ -2.12
CASP4-208ENST00000530309 INTS1Q8N201 2190 aaKnown RBP1.8□□□□□ -2.12
CASP4-208ENST00000530309 BRCA2P51587 3418 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 RP1L1Q8IWN7 2480 aaPredicted RBP1.79□□□□□ -2.12
CASP4-208ENST00000530309 A0A087WVE0 104 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 TRAV13-2A0A0B4J235 113 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 TRBV7-4A0A0J9YYF1 115 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 M0QY20 66 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 NDUFA1O15239 70 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 NDUFC1O43677 76 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 COX6CP09669 75 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
CASP4-208ENST00000530309 RPL39P62891 51 aaKnown RBP1.79□□□□□ -2.12
CASP4-208ENST00000530309 VMA21Q3ZAQ7 101 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 VMO1Q7Z5L0 202 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 Q8N6K4 173 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 LINC00308Q8TCZ7 52 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 LINC00474Q9P2X8 69 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 KAAG1Q9UBP8 84 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 UNC80Q8N2C7 3258 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 USP34Q70CQ2 3546 aa1.79□□□□□ -2.12
CASP4-208ENST00000530309 ZFHX3Q15911 3703 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 SPTBN5Q9NRC6 3674 aaKnown RBP1.78□□□□□ -2.12
CASP4-208ENST00000530309 VCANP13611 3396 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 BUB1B-PAK6H3BSN5 160 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 PRM2P04554 102 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 DEFB133Q30KQ1 61 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 BPESC1Q9GZL8 116 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 LAMTOR3Q9UHA4 124 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 NDUFA12Q9UI09 145 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 PKIGQ9Y2B9 76 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 LAMA3Q16787 3333 aa1.78□□□□□ -2.12
CASP4-208ENST00000530309 PI4KAP42356 2102 aa1.78□□□□□ -2.13
CASP4-208ENST00000530309 FRYQ5TBA9 3013 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 WDR87Q6ZQQ6 2873 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 WNK2Q9Y3S1 2297 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 CADP27708 2225 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 MALRD1Q5VYJ5 2156 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 M0R1W7 72 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 MIFP14174 115 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 UNQ6190/PRO20217Q6UXQ8 127 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 COPS9Q8WXC6 57 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 RETNLBQ9BQ08 111 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
CASP4-208ENST00000530309 LAMA2P24043 3122 aaKnown RBP1.77□□□□□ -2.13
CASP4-208ENST00000530309 CACNA1EQ15878 2313 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 LOC110117498A0A087WWA1 95 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 A0A096LNT2 108 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 TRAV21A0A0B4J279 112 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 A8MTW9 85 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 H0YGX0 51 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 PRB4P10163 310 aaPredicted RBP1.76□□□□□ -2.13
CASP4-208ENST00000530309 CCL3L1P16619 93 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 SPANXN1Q5VSR9 72 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 C20orf197Q8N268 126 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 AHCTF1Q8WYP5 2266 aa1.76□□□□□ -2.13
CASP4-208ENST00000530309 TNRC18O15417 2968 aaPredicted RBP1.75□□□□□ -2.13
CASP4-208ENST00000530309 TRAV10A0A0B4J240 114 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 IGKV3OR2-268A0A0C4DH90 116 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 PHF5AQ7RTV0 110 aaKnown RBP1.75□□□□□ -2.13
CASP4-208ENST00000530309 WFDC11Q8NEX6 87 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 CFAP54Q96N23 3096 aa1.75□□□□□ -2.13
CASP4-208ENST00000530309 CDH23Q9H251 3354 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 LYZL6O75951 148 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 CCL4P13236 92 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 BLCAPP62952 87 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 COX6A2Q02221 97 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 ESRGQ1W209 222 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 Q6ZQT0 140 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 DEFB132Q7Z7B7 95 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 CYP4F30PQ9H0H9 118 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 C14orf132Q9NPU4 83 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 CDKN2A-AS1Q9UH64 79 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 URB1O60287 2271 aaKnown RBP1.74□□□□□ -2.13
CASP4-208ENST00000530309 MUC4Q99102 2169 aa1.74□□□□□ -2.13
CASP4-208ENST00000530309 FREM2Q5SZK8 3169 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 TRAV23DV6A0A075B6W5 121 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 A6NN06 94 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 F8WEM9 126 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 JMJD7-PLA2G4BH0Y9G9 81 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 C19orf84I3L1E1 186 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 NCR3O14931 201 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 DNAL4O96015 105 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 DEFB114Q30KQ6 69 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 ENHOQ6UWT2 76 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 BRK1Q8WUW1 75 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 MKI67P46013 3256 aaKnown RBP1.73□□□□□ -2.13
CASP4-208ENST00000530309 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
CASP4-208ENST00000530309 KMT2BQ9UMN6 2715 aaPredicted RBP1.73□□□□□ -2.13
CASP4-208ENST00000530309 DSPP15924 2871 aaKnown RBP1.72□□□□□ -2.13
CASP4-208ENST00000530309 M0R2N4 97 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 M0R378 163 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 APELAP0DMC3 54 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms