RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 C11orf52Q96A22 123 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 PMCHL2Q9BQD1 86 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 TRAV8-4A0A0B4J246 113 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 A0A1W2PPM0 123 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 SMKR1H3BMG3 65 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 CACNG7P62955 275 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 C9orf153Q5TBE3 101 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 SPANXN1Q5VSR9 72 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 Q6ZRP5 223 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 COX8CQ7Z4L0 72 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 C3orf22Q8N5N4 141 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 CARD19Q96LW7 228 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 PYGO1Q9Y3Y4 419 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 LINC01549A6NIU2 74 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 UBE2L6O14933 153 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 CRYGAP11844 174 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 NMUP48645 174 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 UBE2G1P62253 170 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 ZNF726P1Q15940 193 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 RPL7L1Q6DKI1 246 aaKnown RBP2.15□□□□□ -2.07
PTPRC-213ENST00000529828 ANKRD29Q8N6D5 301 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 TMEM243Q9BU79 118 aa2.15□□□□□ -2.07
PTPRC-213ENST00000529828 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 A0A0A0MQY5 61 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 FAM236AA0A1B0GUQ0 79 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 FAM236BA0A1B0GV22 79 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 H3BMG7 143 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 FOXA3P55318 350 aaPredicted RBP2.14□□□□□ -2.07
PTPRC-213ENST00000529828 SUMO4Q6EEV6 95 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 C18orf32Q8TCD1 76 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 COPS9Q8WXC6 57 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 CHCHD10Q8WYQ3 142 aaPredicted RBP2.14□□□□□ -2.07
PTPRC-213ENST00000529828 GNB1LQ9BYB4 327 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 IMUPQ9GZP8 106 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 PSORS1C2Q9UIG4 136 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 GVQW2A0A096LPI5 108 aaPredicted RBP2.14□□□□□ -2.07
PTPRC-213ENST00000529828 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 APOMO95445 188 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 LTAP01374 205 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 XCL1P47992 114 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 C1orf137Q5JT78 98 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 SLC25A34Q6PIV7 304 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
PTPRC-213ENST00000529828 C2orf48Q96LS8 159 aa2.14□□□□□ -2.07
PTPRC-213ENST00000529828 EIF5A2Q9GZV4 153 aaKnown RBP2.14□□□□□ -2.07
PTPRC-213ENST00000529828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.13□□□□□ -2.07
PTPRC-213ENST00000529828 TRAV13-1A0A0B4J241 112 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 A0A1B0GUV1 79 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 IGKV2-29A2NJV5 120 aaPredicted RBP2.13□□□□□ -2.07
PTPRC-213ENST00000529828 C9JQL5 133 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 NDUFC2-KCTD14E9PQ53 114 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 M0QY20 66 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 TRACP01848 142 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 SRP19P09132 144 aaKnown RBP2.13□□□□□ -2.07
PTPRC-213ENST00000529828 SCGB1D4Q6XE38 83 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 ATP5L2Q7Z4Y8 100 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 PRR15Q8IV56 129 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 PPDPFLQ8WWR9 84 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 C20orf78Q9BR46 151 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 OSTCQ9NRP0 149 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 H3BUT2 72 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 CCL20P78556 96 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 FAM213BQ8TBF2 198 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 PRELID3AQ96N28 172 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 LINC00474Q9P2X8 69 aa2.13□□□□□ -2.07
PTPRC-213ENST00000529828 TRBV7-6A0A0J9YX20 115 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 SYS1-DBNDD2H3BUS1 97 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 SUMO2P61956 95 aaKnown RBP2.12□□□□□ -2.07
PTPRC-213ENST00000529828 SYCNQ0VAF6 134 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 ETDBQ3ZM63 59 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 C9orf116Q5BN46 136 aaPredicted RBP2.12□□□□□ -2.07
PTPRC-213ENST00000529828 KRTAP11-1Q8IUC1 163 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 KRTAP3-1Q9BYR8 98 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 SMIM26A0A096LP01 95 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 PRYO14603 147 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 PPP1R17O96001 155 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 LINC01545Q5VT33 79 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 DIRC1Q969H9 104 aa2.12□□□□□ -2.07
PTPRC-213ENST00000529828 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 A0A087WZ39 114 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 IGHV1-58A0A0C4DH39 117 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 FAM168BA1KXE4 195 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 ZNF727A8MUV8 499 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 H0Y9J4 135 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 K7EMI3 77 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 IGLV7-43P04211 117 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 KRTAP1-4P0C5Y4 121 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 COX7CP15954 63 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 UBE2D1P51668 147 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 RPL39LQ96EH5 51 aaKnown RBP2.11□□□□□ -2.07
PTPRC-213ENST00000529828 PGLYRP4Q96LB8 373 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 OPRPNQ99935 248 aaPredicted RBP2.11□□□□□ -2.07
PTPRC-213ENST00000529828 TRBV7-7A0A0K0K1E9 115 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 LINC00959A0A1B0GUT2 108 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 APCSP02743 223 aa2.11□□□□□ -2.07
PTPRC-213ENST00000529828 SMIM13P0DJ93 91 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms