RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 DMAC1Q96GE9 116 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 HIGD2AQ9BW72 106 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 FAM215AQ9Y5M1 114 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 USF3Q68DE3 2245 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 BAHCC1Q9P281 2608 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 IGKV1D-42A0A075B6H8 117 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 H0Y9P7 68 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 TFF1P04155 84 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 MGPP08493 103 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 DEFA4P12838 97 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 ERHP84090 104 aaKnown RBP1.67□□□□□ -2.14
CTR9-204ENST00000529355 LINC00322Q6ZN03 302 aaPredicted RBP1.67□□□□□ -2.14
CTR9-204ENST00000529355 Q6ZS52 159 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 FDCSPQ8NFU4 85 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 WFDC10AQ9H1F0 79 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 PLAC8Q9NZF1 115 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 KLK9Q9UKQ9 250 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 CACNA1GO43497 2377 aa1.67□□□□□ -2.14
CTR9-204ENST00000529355 IGHV1-18A0A0C4DH31 117 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 H3BSH0 61 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 CCL22O00626 93 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 IGLV3-1P01715 115 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 HAMPP81172 84 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 CSAG1Q6PB30 78 aa1.66□□□□□ -2.14
CTR9-204ENST00000529355 ZNF625Q96I27 306 aaPredicted RBP1.66□□□□□ -2.14
CTR9-204ENST00000529355 F5P12259 2224 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 CADP27708 2225 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 ETDCA0A1B0GVM5 59 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 ODF3BA8MYP8 253 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 J3QKU1 62 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 NDUFA4O00483 81 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 UQCR11O14957 56 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 NDUFA1O15239 70 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 Q8TAT8 98 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 GAFA1Q96PS6 74 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 RP1P56715 2156 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
CTR9-204ENST00000529355 ABCA4P78363 2273 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 IGHV3-64A0A075B6Q5 118 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 TRGV4A0A0C4DH28 118 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 CLPSL1A2RUU4 121 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 NUPR2A6NF83 97 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 C17orf98A8MV24 154 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 CCL18P55774 89 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 C4orf3Q8WVX3 66 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 KCNQ1DNQ9H478 68 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 SDK1Q7Z5N4 2213 aa1.64□□□□□ -2.15
CTR9-204ENST00000529355 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 NCR3O14931 201 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 MRPL33O75394 65 aaKnown RBP1.63□□□□□ -2.15
CTR9-204ENST00000529355 DEFB103AP81534 67 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 COX17Q14061 63 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 DEFB113Q30KQ7 82 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 DEFB112Q30KQ8 113 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 SPATA8Q6RVD6 105 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 TTTY12Q9BZ98 90 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 MED13LQ71F56 2210 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
CTR9-204ENST00000529355 URB1O60287 2271 aaKnown RBP1.63□□□□□ -2.15
CTR9-204ENST00000529355 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
CTR9-204ENST00000529355 CCL3L1P16619 93 aa1.62□□□□□ -2.15
CTR9-204ENST00000529355 RPS27P42677 84 aaKnown RBP1.62□□□□□ -2.15
CTR9-204ENST00000529355 PRCDQ00LT1 54 aa1.62□□□□□ -2.15
CTR9-204ENST00000529355 KRTAP26-1Q6PEX3 210 aa1.62□□□□□ -2.15
CTR9-204ENST00000529355 COA5Q86WW8 74 aa1.62□□□□□ -2.15
CTR9-204ENST00000529355 CNTRLQ7Z7A1 2325 aa1.61□□□□□ -2.15
CTR9-204ENST00000529355 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
CTR9-204ENST00000529355 PIGYQ3MUY2 71 aa1.61□□□□□ -2.15
CTR9-204ENST00000529355 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
CTR9-204ENST00000529355 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
CTR9-204ENST00000529355 COX7BP24311 80 aa1.6□□□□□ -2.15
CTR9-204ENST00000529355 CRIP1P50238 77 aa1.6□□□□□ -2.15
CTR9-204ENST00000529355 POLR2KP53803 58 aaKnown RBP1.6□□□□□ -2.15
CTR9-204ENST00000529355 SPINK7P58062 85 aa1.6□□□□□ -2.15
CTR9-204ENST00000529355 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
CTR9-204ENST00000529355 ICE1Q9Y2F5 2266 aa1.59□□□□□ -2.15
CTR9-204ENST00000529355 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
CTR9-204ENST00000529355 SMIM11BQ8TCY0 68 aa1.59□□□□□ -2.15
CTR9-204ENST00000529355 MINOS1-NBL1R4GNA1 71 aa1.59□□□□□ -2.15
CTR9-204ENST00000529355 ASXL3Q9C0F0 2248 aa1.59□□□□□ -2.16
CTR9-204ENST00000529355 KMT2BQ9UMN6 2715 aaPredicted RBP1.59□□□□□ -2.16
CTR9-204ENST00000529355 DOPEY2Q9Y3R5 2298 aa1.59□□□□□ -2.16
CTR9-204ENST00000529355 ASCC3Q8N3C0 2202 aaKnown RBP1.58□□□□□ -2.16
CTR9-204ENST00000529355 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.58□□□□□ -2.16
CTR9-204ENST00000529355 DEFB131BA0A096LNP1 70 aa1.58□□□□□ -2.16
CTR9-204ENST00000529355 TRBV6-4A0A1B0GX49 114 aa1.58□□□□□ -2.16
CTR9-204ENST00000529355 RNASE3P12724 160 aaKnown RBP1.58□□□□□ -2.16
CTR9-204ENST00000529355 COL4A5P29400 1685 aa1.58□□□□□ -2.16
CTR9-204ENST00000529355 TRGV1A0A0A0MS02 117 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 A0A1B0GU69 56 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 H3BRN7 92 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 LINC00158P58513 81 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 Q6ZTI0 123 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 C9orf163Q8N9P6 203 aa1.57□□□□□ -2.16
CTR9-204ENST00000529355 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
CTR9-204ENST00000529355 LINC00959A0A1B0GUT2 108 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms