RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PSPHP1O15172 72 aa8.52□□□□□ -1.04
TSKU-203ENST00000527881 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.04
TSKU-203ENST00000527881 NAV2Q8IVL1 2488 aa8.52□□□□□ -1.05
TSKU-203ENST00000527881 PMAIP1Q13794 54 aa8.52□□□□□ -1.05
TSKU-203ENST00000527881 C9orf66Q5T8R8 295 aa8.52□□□□□ -1.05
TSKU-203ENST00000527881 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 CR1P17927 2039 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 PRR4Q16378 134 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 IGHV4-28A0A0C4DH34 117 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 COX7BP24311 80 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 C10orf25Q5T742 122 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 LINC01356Q8N9X3 169 aa8.51□□□□□ -1.05
TSKU-203ENST00000527881 CELSR2Q9HCU4 2923 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 CENPEQ02224 2701 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 ACACBO00763 2458 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 ESM1Q9NQ30 184 aa8.5□□□□□ -1.05
TSKU-203ENST00000527881 LRRK2Q5S007 2527 aa8.49□□□□□ -1.05
TSKU-203ENST00000527881 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
TSKU-203ENST00000527881 FAM208BQ5VWN6 2430 aa8.49□□□□□ -1.05
TSKU-203ENST00000527881 H3BQ85 93 aa8.48□□□□□ -1.05
TSKU-203ENST00000527881 REG3AQ06141 175 aa8.48□□□□□ -1.05
TSKU-203ENST00000527881 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
TSKU-203ENST00000527881 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
TSKU-203ENST00000527881 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
TSKU-203ENST00000527881 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
TSKU-203ENST00000527881 DEFB105AQ8NG35 78 aa8.47□□□□□ -1.05
TSKU-203ENST00000527881 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
TSKU-203ENST00000527881 Q6YL49 198 aa8.47□□□□□ -1.05
TSKU-203ENST00000527881 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
TSKU-203ENST00000527881 CYSRT1A8MQ03 144 aa8.46□□□□□ -1.05
TSKU-203ENST00000527881 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
TSKU-203ENST00000527881 Q6ZTC4 211 aa8.46□□□□□ -1.06
TSKU-203ENST00000527881 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
TSKU-203ENST00000527881 CCL24O00175 119 aa8.46□□□□□ -1.06
TSKU-203ENST00000527881 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
TSKU-203ENST00000527881 GIG44P09565 113 aaPredicted RBP8.45□□□□□ -1.06
TSKU-203ENST00000527881 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
TSKU-203ENST00000527881 FBN2P35556 2912 aa8.44□□□□□ -1.06
TSKU-203ENST00000527881 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
TSKU-203ENST00000527881 CCDC168Q8NDH2 2452 aa8.44□□□□□ -1.06
TSKU-203ENST00000527881 MXRA5Q9NR99 2828 aa8.43□□□□□ -1.06
TSKU-203ENST00000527881 GCN1Q92616 2671 aaKnown RBP8.43□□□□□ -1.06
TSKU-203ENST00000527881 C1orf64Q8NEQ6 169 aa8.42□□□□□ -1.06
TSKU-203ENST00000527881 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
TSKU-203ENST00000527881 PKD1L2Q7Z442 2459 aa8.42□□□□□ -1.06
TSKU-203ENST00000527881 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
TSKU-203ENST00000527881 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
TSKU-203ENST00000527881 SPTBN4Q9H254 2564 aa8.41□□□□□ -1.06
TSKU-203ENST00000527881 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
TSKU-203ENST00000527881 CACNA1AO00555 2505 aa8.41□□□□□ -1.06
TSKU-203ENST00000527881 HTN3P15516 51 aa8.41□□□□□ -1.06
TSKU-203ENST00000527881 APCP25054 2843 aa8.4□□□□□ -1.06
TSKU-203ENST00000527881 RETNQ9HD89 108 aa8.4□□□□□ -1.06
TSKU-203ENST00000527881 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
TSKU-203ENST00000527881 DEFB4AO15263 64 aa8.4□□□□□ -1.06
TSKU-203ENST00000527881 Q6ZRP5 223 aa8.4□□□□□ -1.07
TSKU-203ENST00000527881 MYO18BQ8IUG5 2567 aa8.39□□□□□ -1.07
TSKU-203ENST00000527881 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
TSKU-203ENST00000527881 ELOF1P60002 83 aaKnown RBP8.38□□□□□ -1.07
TSKU-203ENST00000527881 DSCR9P59020 149 aa8.37□□□□□ -1.07
TSKU-203ENST00000527881 IGHV4-31P0DP07 118 aa8.37□□□□□ -1.07
TSKU-203ENST00000527881 ABCA12Q86UK0 2595 aa8.37□□□□□ -1.07
TSKU-203ENST00000527881 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
TSKU-203ENST00000527881 A8MUN3 132 aa8.36□□□□□ -1.07
TSKU-203ENST00000527881 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 TEX15Q9BXT5 2789 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 NF1P21359 2839 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 CAMK2N2Q96S95 79 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
TSKU-203ENST00000527881 CFAP46Q8IYW2 2715 aa8.34□□□□□ -1.07
TSKU-203ENST00000527881 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
TSKU-203ENST00000527881 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
TSKU-203ENST00000527881 Q1T7F1 81 aa8.34□□□□□ -1.07
TSKU-203ENST00000527881 Q6ZRU5 148 aa8.34□□□□□ -1.07
TSKU-203ENST00000527881 UTP20O75691 2785 aaKnown RBP8.33□□□□□ -1.08
TSKU-203ENST00000527881 PIEZO1Q92508 2521 aa8.33□□□□□ -1.08
TSKU-203ENST00000527881 MRPL55Q7Z7F7 128 aaKnown RBP8.32□□□□□ -1.08
TSKU-203ENST00000527881 FLNCQ14315 2725 aa8.32□□□□□ -1.08
TSKU-203ENST00000527881 DOPEY1Q5JWR5 2465 aa8.32□□□□□ -1.08
TSKU-203ENST00000527881 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
TSKU-203ENST00000527881 M0R378 163 aa8.31□□□□□ -1.08
TSKU-203ENST00000527881 MTORP42345 2549 aa8.31□□□□□ -1.08
TSKU-203ENST00000527881 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
TSKU-203ENST00000527881 KPRPQ5T749 579 aaPredicted RBP8.3□□□□□ -1.08
TSKU-203ENST00000527881 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
TSKU-203ENST00000527881 A8MU10 97 aa8.29□□□□□ -1.08
TSKU-203ENST00000527881 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
TSKU-203ENST00000527881 VPREB1P12018 145 aa8.28□□□□□ -1.08
TSKU-203ENST00000527881 CD164Q04900 197 aa8.28□□□□□ -1.08
TSKU-203ENST00000527881 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
TSKU-203ENST00000527881 F8P00451 2351 aa8.28□□□□□ -1.08
TSKU-203ENST00000527881 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.08
TSKU-203ENST00000527881 ST20-AS1Q8NBB2 130 aa8.27□□□□□ -1.08
TSKU-203ENST00000527881 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms