RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 H0Y9P7 68 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 IGLV1-44P01699 117 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 REG3AQ06141 175 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 HIGD2BQ4VC39 106 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 Q6ZR54 194 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 C9orf163Q8N9P6 203 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 NPBQ8NG41 125 aa2.36□□□□□ -2.03
CLNS1A-209ENST00000527299 IGHV1-46P01743 117 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 PRB1P04280 392 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 CCL3L1P16619 93 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 IGHV1-2P23083 117 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 PRB3Q04118 309 aaPredicted RBP2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 CCL14Q16627 93 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 Q6ZQY7 126 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 MED13LQ71F56 2210 aa2.35□□□□□ -2.03
CLNS1A-209ENST00000527299 DOPEY2Q9Y3R5 2298 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 CDK2AP2O75956 126 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 DEFB112Q30KQ8 113 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 CNEP1R1Q8N9A8 125 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 Q8NDZ9 215 aa2.34□□□□□ -2.03
CLNS1A-209ENST00000527299 SZT2Q5T011 3432 aa2.34□□□□□ -2.04
CLNS1A-209ENST00000527299 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
CLNS1A-209ENST00000527299 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
CLNS1A-209ENST00000527299 COX17Q14061 63 aa2.33□□□□□ -2.04
CLNS1A-209ENST00000527299 REG3GQ6UW15 175 aa2.33□□□□□ -2.04
CLNS1A-209ENST00000527299 FAM215AQ9Y5M1 114 aa2.33□□□□□ -2.04
CLNS1A-209ENST00000527299 ASXL3Q9C0F0 2248 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 A0A087WSZ3 146 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 IGHV4-61A0A0C4DH41 118 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 MSMBP08118 114 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 KAAG1Q9UBP8 84 aa2.32□□□□□ -2.04
CLNS1A-209ENST00000527299 MKI67P46013 3256 aaKnown RBP2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 MINOS1Q5TGZ0 78 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 Q8IZM0 81 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 Q8N9W7 124 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 SPRR4Q96PI1 79 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 TOMM7Q9P0U1 55 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 KLK12Q9UKR0 248 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 ICE1Q9Y2F5 2266 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 BRCA2P51587 3418 aa2.31□□□□□ -2.04
CLNS1A-209ENST00000527299 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 SDK1Q7Z5N4 2213 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 COL6A3P12111 3177 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 IGLV1-50A0A075B6I6 118 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 IGHV3-11P01762 117 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 P0C880 135 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 PRR34Q9NV39 138 aa2.3□□□□□ -2.04
CLNS1A-209ENST00000527299 CUL9Q8IWT3 2517 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 DEFB131BA0A096LNP1 70 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 IGHV3-74A0A0B4J1X5 117 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 ZNF861PO60384 105 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 LINC00483Q53H64 154 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 DPM3Q9P2X0 92 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 ABCA4P78363 2273 aa2.29□□□□□ -2.04
CLNS1A-209ENST00000527299 WDR87Q6ZQQ6 2873 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 CACNA1GO43497 2377 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 WNK2Q9Y3S1 2297 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 IGLV9-49A0A0B4J1Y8 123 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 K7EQZ3 153 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 UQCR11O14957 56 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 DNAH10OSP0CZ25 163 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 DEFB1P60022 68 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 DEFB133Q30KQ1 61 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 Q8NBF4 154 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 VCANP13611 3396 aa2.28□□□□□ -2.04
CLNS1A-209ENST00000527299 TRIOBPQ9H2D6 2365 aa2.28□□□□□ -2.05
CLNS1A-209ENST00000527299 SPTBN5Q9NRC6 3674 aaKnown RBP2.28□□□□□ -2.05
CLNS1A-209ENST00000527299 TECTAO75443 2155 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 UNC80Q8N2C7 3258 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 A8MTW9 85 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 CHTF8P0CG12 524 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 HRES1P13985 223 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 LAMA3Q16787 3333 aa2.27□□□□□ -2.05
CLNS1A-209ENST00000527299 HTTP42858 3142 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 ALMS1Q8TCU4 4167 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 SPTBN1Q01082 2364 aaKnown RBP2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 IGLV10-54A0A075B6I4 117 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 COX7A1P24310 79 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 CMC4P56277 68 aaPredicted RBP2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 C20orf166-AS1Q96NR2 134 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 CENPFP49454 3210 aa2.26□□□□□ -2.05
CLNS1A-209ENST00000527299 A8MWP4 228 aa2.25□□□□□ -2.05
CLNS1A-209ENST00000527299 K7ERS5 55 aa2.25□□□□□ -2.05
CLNS1A-209ENST00000527299 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
CLNS1A-209ENST00000527299 RHPN1-AS1Q9BWJ2 59 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms