RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 C20orf203Q8NBC4 194 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 PTH2Q96A98 100 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 RPL39LQ96EH5 51 aaKnown RBP7.75□□□□□ -1.17
CAPN1-204ENST00000526468 DNAJC30Q96LL9 226 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 IGHV1-58A0A0C4DH39 117 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-204ENST00000526468 TRACP01848 142 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 RNASE3P12724 160 aaKnown RBP7.74□□□□□ -1.17
CAPN1-204ENST00000526468 DAZ4Q86SG3 579 aaKnown RBP7.74□□□□□ -1.17
CAPN1-204ENST00000526468 RMI2Q96E14 147 aa7.74□□□□□ -1.17
CAPN1-204ENST00000526468 DAZ3Q9NR90 486 aaKnown RBP7.74□□□□□ -1.17
CAPN1-204ENST00000526468 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
CAPN1-204ENST00000526468 J3KT08 172 aa7.73□□□□□ -1.17
CAPN1-204ENST00000526468 ATOX1O00244 68 aa7.73□□□□□ -1.17
CAPN1-204ENST00000526468 TSHBP01222 138 aa7.73□□□□□ -1.17
CAPN1-204ENST00000526468 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
CAPN1-204ENST00000526468 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
CAPN1-204ENST00000526468 IGKV2D-24A0A075B6R9 120 aa7.72□□□□□ -1.17
CAPN1-204ENST00000526468 TRIAP1O43715 76 aa7.72□□□□□ -1.17
CAPN1-204ENST00000526468 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
CAPN1-204ENST00000526468 F5H697 171 aa7.71□□□□□ -1.18
CAPN1-204ENST00000526468 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
CAPN1-204ENST00000526468 SFTA2Q6UW10 78 aa7.71□□□□□ -1.18
CAPN1-204ENST00000526468 H7C423 109 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 HERV-K104P63124 156 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 FAM74A4Q5TZK3 123 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 SMIM20Q8N5G0 67 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 C3orf22Q8N5N4 141 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 LINC00526Q96FQ7 95 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
CAPN1-204ENST00000526468 M0QY20 66 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 COX7A2LO14548 114 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 NDUFA1O15239 70 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 ZNF56Q15929 161 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 S100A7L2Q5SY68 101 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 OR13C6PQ8NH95 151 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 JPT2Q9H910 190 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 KLK12Q9UKR0 248 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
CAPN1-204ENST00000526468 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
CAPN1-204ENST00000526468 TEX49A0A1B0GTD5 131 aa7.68□□□□□ -1.18
CAPN1-204ENST00000526468 CCDC179H3BU77 68 aa7.68□□□□□ -1.18
CAPN1-204ENST00000526468 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
CAPN1-204ENST00000526468 Q9UF83 564 aa7.68□□□□□ -1.18
CAPN1-204ENST00000526468 IGLV5-45A0A087WSX0 123 aa7.67□□□□□ -1.18
CAPN1-204ENST00000526468 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
CAPN1-204ENST00000526468 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
CAPN1-204ENST00000526468 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
CAPN1-204ENST00000526468 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
CAPN1-204ENST00000526468 A0A087WWL8 130 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 CRPP02741 224 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 CRYGAP11844 174 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
CAPN1-204ENST00000526468 TMEM258P61165 79 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 HERVK_113P63121 156 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 LITAFQ99732 161 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
CAPN1-204ENST00000526468 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.18
CAPN1-204ENST00000526468 COX7CP15954 63 aa7.65□□□□□ -1.18
CAPN1-204ENST00000526468 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
CAPN1-204ENST00000526468 C14orf177Q52M58 125 aa7.65□□□□□ -1.18
CAPN1-204ENST00000526468 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CAPN1-204ENST00000526468 C1orf43Q9BWL3 253 aa7.65□□□□□ -1.18
CAPN1-204ENST00000526468 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
CAPN1-204ENST00000526468 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
CAPN1-204ENST00000526468 NDUFC2-KCTD14E9PQ53 114 aa7.64□□□□□ -1.19
CAPN1-204ENST00000526468 OXTP01178 125 aa7.64□□□□□ -1.19
CAPN1-204ENST00000526468 PRSS2P07478 247 aa7.64□□□□□ -1.19
CAPN1-204ENST00000526468 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
CAPN1-204ENST00000526468 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
CAPN1-204ENST00000526468 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
CAPN1-204ENST00000526468 H7C2G1 150 aa7.63□□□□□ -1.19
CAPN1-204ENST00000526468 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
CAPN1-204ENST00000526468 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
CAPN1-204ENST00000526468 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
CAPN1-204ENST00000526468 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
CAPN1-204ENST00000526468 H0YGX0 51 aa7.62□□□□□ -1.19
CAPN1-204ENST00000526468 BCE1O60756 84 aa7.62□□□□□ -1.19
CAPN1-204ENST00000526468 USP17L23D6RBM5 183 aa7.61□□□□□ -1.19
CAPN1-204ENST00000526468 DNAL4O96015 105 aa7.61□□□□□ -1.19
CAPN1-204ENST00000526468 ANGP03950 147 aaKnown RBP7.61□□□□□ -1.19
CAPN1-204ENST00000526468 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
CAPN1-204ENST00000526468 Q6JHZ5 121 aa7.61□□□□□ -1.19
CAPN1-204ENST00000526468 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
CAPN1-204ENST00000526468 CHCHD5Q9BSY4 110 aa7.6□□□□□ -1.19
CAPN1-204ENST00000526468 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
CAPN1-204ENST00000526468 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
CAPN1-204ENST00000526468 H3BQ85 93 aa7.59□□□□□ -1.19
CAPN1-204ENST00000526468 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
CAPN1-204ENST00000526468 GAGE2AQ6NT46 116 aa7.59□□□□□ -1.19
CAPN1-204ENST00000526468 RPL28P46779 137 aaKnown RBP7.58□□□□□ -1.2
CAPN1-204ENST00000526468 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms