RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 KIF20BQ96Q89 1820 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 LRRC37AA6NMS7 1700 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 SUPT6HQ7KZ85 1726 aaKnown RBP0.42□□□□□ -2.34
COPB1-203ENST00000525214 CHD8Q9HCK8 2581 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
COPB1-203ENST00000525214 MYMXA0A1B0GTQ4 84 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 COX8AP10176 69 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 ADIRFQ15847 76 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 Q5VSD8 79 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 ST20Q9HBF5 79 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 KNL1Q8NG31 2342 aa0.42□□□□□ -2.34
COPB1-203ENST00000525214 MAP1BP46821 2468 aaKnown RBP0.41□□□□□ -2.34
COPB1-203ENST00000525214 SPINK1P00995 79 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 COX6B1P14854 86 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 UBR3Q6ZT12 1888 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 ALKQ9UM73 1620 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 ATP7BP35670 1465 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 ARHGAP35Q9NRY4 1499 aa0.41□□□□□ -2.34
COPB1-203ENST00000525214 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 KIAA0556O60303 1618 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 A0A1B0GUT8 65 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 CEBPZOSA8MTT3 80 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 K7EQZ3 153 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 CFDP00746 253 aaPredicted RBP0.4□□□□□ -2.35
COPB1-203ENST00000525214 CRIPTQ9P021 101 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 PKD1L3Q7Z443 1732 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
COPB1-203ENST00000525214 ABCA2Q9BZC7 2435 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 SLIT1O75093 1534 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 VWFP04275 2813 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 H3BUT2 72 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 KMT2DO14686 5537 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 DEFB112Q30KQ8 113 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 ERVK-7P63135 1459 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 BSNQ9UPA5 3926 aa0.39□□□□□ -2.35
COPB1-203ENST00000525214 NEBP20929 6669 aa0.38□□□□□ -2.35
COPB1-203ENST00000525214 WNK1Q9H4A3 2382 aa0.38□□□□□ -2.35
COPB1-203ENST00000525214 WNK2Q9Y3S1 2297 aa0.38□□□□□ -2.35
COPB1-203ENST00000525214 NCOR2Q9Y618 2525 aa0.38□□□□□ -2.35
COPB1-203ENST00000525214 TSC2P49815 1807 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 SPTY2D1-AS1A0A0U1RR47 76 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 I3L3M4 83 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 NDUFB1O75438 58 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 SPRR1AP35321 89 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 RPL38P63173 70 aaKnown RBP0.37□□□□□ -2.35
COPB1-203ENST00000525214 DEFB109BQ30KR1 87 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 BVES-AS1Q5T3Y7 98 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 GAFA1Q96PS6 74 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 FMN2Q9NZ56 1722 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 DMBT1Q9UGM3 2413 aaPredicted RBP0.37□□□□□ -2.35
COPB1-203ENST00000525214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.37□□□□□ -2.35
COPB1-203ENST00000525214 DCAF1Q9Y4B6 1507 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 CELSR1Q9NYQ6 3014 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 RGPD2P0DJD1 1756 aa0.37□□□□□ -2.35
COPB1-203ENST00000525214 PPRC1Q5VV67 1664 aaKnown RBP0.37□□□□□ -2.35
COPB1-203ENST00000525214 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
COPB1-203ENST00000525214 DIP2BQ9P265 1576 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 NKTRP30414 1462 aaKnown RBP0.36□□□□□ -2.35
COPB1-203ENST00000525214 FAT2Q9NYQ8 4349 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 RGPD1P0DJD0 1748 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 PDE4DIPQ5VU43 2346 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 PKD1L1Q8TDX9 2849 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 TMEM131LA2VDJ0 1609 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 TRAV21A0A0B4J279 112 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 SPRR1BP22528 89 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 ABCC1P33527 1531 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 URB2Q14146 1524 aaKnown RBP0.36□□□□□ -2.35
COPB1-203ENST00000525214 KDM5DQ9BY66 1539 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 COL14A1Q05707 1796 aaKnown RBP0.36□□□□□ -2.35
COPB1-203ENST00000525214 CLIP1P30622 1438 aa0.36□□□□□ -2.35
COPB1-203ENST00000525214 RRBP1Q9P2E9 1410 aaKnown RBP0.36□□□□□ -2.35
COPB1-203ENST00000525214 REV3LO60673 3130 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 LRRC7Q96NW7 1537 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 CPSF4LA6NMK7 179 aaKnown RBP0.35□□□□□ -2.35
COPB1-203ENST00000525214 CCL22O00626 93 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 SPINK4O60575 86 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 COX7BP24311 80 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 WFDC9Q8NEX5 89 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 U3KQA8 63 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
COPB1-203ENST00000525214 DEFB121Q5J5C9 76 aa0.34□□□□□ -2.36
COPB1-203ENST00000525214 TENM4Q6N022 2769 aa0.34□□□□□ -2.36
COPB1-203ENST00000525214 C18orf32Q8TCD1 76 aa0.34□□□□□ -2.36
COPB1-203ENST00000525214 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.36
COPB1-203ENST00000525214 MAST4O15021 2626 aa0.34□□□□□ -2.36
COPB1-203ENST00000525214 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.36
COPB1-203ENST00000525214 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
COPB1-203ENST00000525214 CFAP74Q9C0B2 1584 aa0.33□□□□□ -2.36
COPB1-203ENST00000525214 LTN1O94822 1766 aa0.33□□□□□ -2.36
COPB1-203ENST00000525214 A0A087WXM4 84 aa0.33□□□□□ -2.36
COPB1-203ENST00000525214 DEFB105AQ8NG35 78 aa0.33□□□□□ -2.36
COPB1-203ENST00000525214 FXYD6Q9H0Q3 95 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms