RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
HIF3A-208ENST00000524533 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
HIF3A-208ENST00000524533 RHEBQ15382 184 aa9.38□□□□□ -0.91
HIF3A-208ENST00000524533 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
HIF3A-208ENST00000524533 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
HIF3A-208ENST00000524533 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
HIF3A-208ENST00000524533 IFITM2Q01629 132 aa9.37□□□□□ -0.91
HIF3A-208ENST00000524533 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
HIF3A-208ENST00000524533 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
HIF3A-208ENST00000524533 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
HIF3A-208ENST00000524533 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
HIF3A-208ENST00000524533 LINC00158P58513 81 aa9.35□□□□□ -0.91
HIF3A-208ENST00000524533 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
HIF3A-208ENST00000524533 FAT4Q6V0I7 4981 aa9.35□□□□□ -0.91
HIF3A-208ENST00000524533 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
HIF3A-208ENST00000524533 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
HIF3A-208ENST00000524533 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
HIF3A-208ENST00000524533 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
HIF3A-208ENST00000524533 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
HIF3A-208ENST00000524533 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
HIF3A-208ENST00000524533 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
HIF3A-208ENST00000524533 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
HIF3A-208ENST00000524533 TMEM223A0PJW6 202 aa9.3□□□□□ -0.92
HIF3A-208ENST00000524533 PRYO14603 147 aa9.3□□□□□ -0.92
HIF3A-208ENST00000524533 ATP6V1G1O75348 118 aa9.29□□□□□ -0.92
HIF3A-208ENST00000524533 NCR3O14931 201 aa9.28□□□□□ -0.92
HIF3A-208ENST00000524533 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
HIF3A-208ENST00000524533 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
HIF3A-208ENST00000524533 MEIG1Q5JSS6 88 aa9.28□□□□□ -0.92
HIF3A-208ENST00000524533 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
HIF3A-208ENST00000524533 TRAV12-1A0A0B4J245 112 aa9.27□□□□□ -0.93
HIF3A-208ENST00000524533 FP248Q71RG6 208 aaPredicted RBP9.27□□□□□ -0.93
HIF3A-208ENST00000524533 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
HIF3A-208ENST00000524533 Q8NBF4 154 aa9.26□□□□□ -0.93
HIF3A-208ENST00000524533 IFI27L1Q96BM0 104 aa9.26□□□□□ -0.93
HIF3A-208ENST00000524533 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
HIF3A-208ENST00000524533 SPRR1AP35321 89 aa9.25□□□□□ -0.93
HIF3A-208ENST00000524533 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
HIF3A-208ENST00000524533 DAND5Q8N907 189 aa9.25□□□□□ -0.93
HIF3A-208ENST00000524533 HERV-K104P63124 156 aa9.24□□□□□ -0.93
HIF3A-208ENST00000524533 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
HIF3A-208ENST00000524533 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
HIF3A-208ENST00000524533 KCNQ1DNQ9H478 68 aa9.24□□□□□ -0.93
HIF3A-208ENST00000524533 APOC3P02656 99 aa9.23□□□□□ -0.93
HIF3A-208ENST00000524533 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
HIF3A-208ENST00000524533 KRTAP4-16G5E9R7 235 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-208ENST00000524533 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
HIF3A-208ENST00000524533 SNAPINO95295 136 aa9.21□□□□□ -0.94
HIF3A-208ENST00000524533 S100A12P80511 92 aa9.21□□□□□ -0.94
HIF3A-208ENST00000524533 NDUFA12Q9UI09 145 aa9.21□□□□□ -0.94
HIF3A-208ENST00000524533 SPINK1P00995 79 aa9.2□□□□□ -0.94
HIF3A-208ENST00000524533 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
HIF3A-208ENST00000524533 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
HIF3A-208ENST00000524533 MAP1LC3CQ9BXW4 147 aa9.2□□□□□ -0.94
HIF3A-208ENST00000524533 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
HIF3A-208ENST00000524533 NDUFA5Q16718 116 aa9.19□□□□□ -0.94
HIF3A-208ENST00000524533 SVBPQ8N300 66 aa9.19□□□□□ -0.94
HIF3A-208ENST00000524533 GAGE2AQ6NT46 116 aa9.18□□□□□ -0.94
HIF3A-208ENST00000524533 H0Y8G0 127 aa9.17□□□□□ -0.94
HIF3A-208ENST00000524533 HSBP1O75506 76 aa9.17□□□□□ -0.94
HIF3A-208ENST00000524533 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
HIF3A-208ENST00000524533 B5MCH6 92 aa9.16□□□□□ -0.94
HIF3A-208ENST00000524533 MOBPQ13875 183 aa9.16□□□□□ -0.94
HIF3A-208ENST00000524533 ASB16-AS1Q495Z4 193 aa9.16□□□□□ -0.94
HIF3A-208ENST00000524533 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
HIF3A-208ENST00000524533 DDTP30046 118 aa9.15□□□□□ -0.94
HIF3A-208ENST00000524533 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
HIF3A-208ENST00000524533 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
HIF3A-208ENST00000524533 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
HIF3A-208ENST00000524533 TRBV10-2A0A0K0K1G8 114 aa9.13□□□□□ -0.95
HIF3A-208ENST00000524533 LEPROTO15243 131 aa9.13□□□□□ -0.95
HIF3A-208ENST00000524533 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
HIF3A-208ENST00000524533 LOC107984156A0A0G2JMH3 177 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 Q6ZRX8 168 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 ARL17AQ8IVW1 177 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 Q9BRP9 147 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
HIF3A-208ENST00000524533 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
HIF3A-208ENST00000524533 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
HIF3A-208ENST00000524533 PLNP26678 52 aa9.11□□□□□ -0.95
HIF3A-208ENST00000524533 SEC61BP60468 96 aaKnown RBP9.11□□□□□ -0.95
HIF3A-208ENST00000524533 Q8N377 158 aa9.11□□□□□ -0.95
HIF3A-208ENST00000524533 J3QQQ9 107 aa9.1□□□□□ -0.95
HIF3A-208ENST00000524533 LEPROTL1O95214 131 aa9.1□□□□□ -0.95
HIF3A-208ENST00000524533 SLC25A20O43772 301 aa9.09□□□□□ -0.95
HIF3A-208ENST00000524533 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
HIF3A-208ENST00000524533 NMUP48645 174 aa9.08□□□□□ -0.96
HIF3A-208ENST00000524533 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-208ENST00000524533 HERVK_113P61574 105 aa9.08□□□□□ -0.96
HIF3A-208ENST00000524533 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 DPM2O94777 84 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 NDUFC2O95298 119 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
HIF3A-208ENST00000524533 JOSD1Q15040 202 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-208ENST00000524533 C9orf153Q5TBE3 101 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
HIF3A-208ENST00000524533 SERF1AO75920 110 aa9.06□□□□□ -0.96
HIF3A-208ENST00000524533 TRGC2P03986 189 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms