RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 GTSF1LQ9H1H1 148 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 CST9LQ9H4G1 147 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 HIGD1BQ9P298 99 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 HHLA3Q9XRX5 114 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
LINC01339-204ENST00000524094 RNF213Q63HN8 5207 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 DNAH1Q9P2D7 4330 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 TINCRA0A1B0GVN0 87 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 TMEM223A0PJW6 202 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 TMEM262E9PQX1 116 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 H3BNG1 76 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 J3QQQ9 107 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 K7EP13 123 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 LEPROTO15243 131 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 PRM2P04554 102 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 ATP5G1P05496 136 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 SPART-AS1P0CW21 52 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 FGF6P10767 208 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 FABP2P12104 132 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 MRPS36P82909 103 aaKnown RBP1.62□□□□□ -2.15
LINC01339-204ENST00000524094 CIRBPQ14011 172 aaKnown RBP1.62□□□□□ -2.15
LINC01339-204ENST00000524094 FAM222AQ5U5X8 452 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 Q5W150 140 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 SFTA2Q6UW10 78 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 Q6ZUT4 128 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 DEFB104AQ8WTQ1 72 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 RAB37Q96AX2 223 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 AMELXQ99217 191 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 CHCHD7Q9BUK0 85 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 C11orf68Q9H3H3 251 aaKnown RBP1.62□□□□□ -2.15
LINC01339-204ENST00000524094 NHP2Q9NX24 153 aaKnown RBP1.62□□□□□ -2.15
LINC01339-204ENST00000524094 PRO0255Q9UI72 69 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 UBE2D4Q9Y2X8 147 aa1.62□□□□□ -2.15
LINC01339-204ENST00000524094 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 DYNC2H1Q8NCM8 4307 aaKnown RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 IGLV4-69A0A075B6H9 119 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 IGHV3-64A0A075B6Q5 118 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 IGKV2D-26A0A0A0MRZ7 120 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 TRBV6-8A0A0A6YYG3 113 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV13-1A0A0B4J241 112 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 IGHV1-58A0A0C4DH39 117 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 FAM240AA0A1B0GVK7 77 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 F5H768 121 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 HTN3P15516 51 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 ZNF22P17026 224 aaPredicted RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 PFN2P35080 140 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 UBE2D1P51668 147 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 KRTAP12-2P59991 146 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 SS18Q15532 418 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 RNASE13Q5GAN3 156 aaKnown RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 MEIG1Q5JSS6 88 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 KPRPQ5T749 579 aaPredicted RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 C2orf91Q6ZV80 131 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 Q6ZVH6 145 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 ATP6V0E2Q8NHE4 81 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 TTTY13Q9BZ97 58 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 TP73-AS1Q9UF72 201 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 ICOSQ9Y6W8 199 aa1.61□□□□□ -2.15
LINC01339-204ENST00000524094 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
LINC01339-204ENST00000524094 LYSTQ99698 3801 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 DNAH7Q8WXX0 4024 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 HECTD4Q9Y4D8 3996 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV8-4A0A0B4J246 113 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 A0A0J9YY99 117 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 A0A1W2PPM0 123 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 H0Y9J4 135 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 H3BUT2 72 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 K7EP34 96 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 TAX1BP3O14907 124 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 DEFB4AO15263 64 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 APOMO95445 188 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 CRPP02741 224 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 COX6CP09669 75 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 SPINK8P0C7L1 97 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 SCGB1C2P0DMR2 95 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 IGHV3-30-3P0DP02 117 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 IFITM1P13164 125 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 PSMB2P49721 201 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 FXYD2P54710 66 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 CD164Q04900 197 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 SYCNQ0VAF6 134 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 ZFAND6Q6FIF0 208 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 FAM19A3Q7Z5A8 133 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 FAM19A1Q7Z5A9 133 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 C15orf53Q8NAA6 179 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 Q8NAQ8 132 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 MUC7Q8TAX7 377 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 CIRBP-AS1Q8TBR5 109 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 CDC42SE2Q9NRR3 84 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 SPANXB1Q9NS25 103 aaPredicted RBP1.6□□□□□ -2.15
LINC01339-204ENST00000524094 CDKN2A-AS1Q9UH64 79 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 NDUFA12Q9UI09 145 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 SPCS1Q9Y6A9 102 aa1.6□□□□□ -2.15
LINC01339-204ENST00000524094 STAB2Q8WWQ8 2551 aa1.59□□□□□ -2.15
LINC01339-204ENST00000524094 SMIM26A0A096LP01 95 aa1.59□□□□□ -2.15
LINC01339-204ENST00000524094 A0A096LPF7 62 aa1.59□□□□□ -2.15
LINC01339-204ENST00000524094 TRAV8-3A0A0A6YYJ7 113 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms