RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 COL5A1P20908 1838 aaPredicted RBP3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 USP9XQ93008 2570 aaPredicted RBP3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 ARL14EPLP0DKL9 152 aa3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 ARFGEF3Q5TH69 2177 aa3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 MUC3AQ02505 3323 aa3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 KMT2BQ9UMN6 2715 aaPredicted RBP3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 COL4A5P29400 1685 aa3.33□□□□□ -1.88
EFCAB13-213ENST00000523978 ZFHX2Q9C0A1 2572 aaPredicted RBP3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 EYSQ5T1H1 3165 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 ZNF861PO60384 105 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 IGLV3-1P01715 115 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 IL9P15248 144 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 Q6ZTI0 123 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 KLK9Q9UKQ9 250 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 NUP214P35658 2090 aaPredicted RBP3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 ACACBO00763 2458 aa3.32□□□□□ -1.88
EFCAB13-213ENST00000523978 IGLV4-69A0A075B6H9 119 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 COX17Q14061 63 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 GAFA1Q96PS6 74 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 NCOR2Q9Y618 2525 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
EFCAB13-213ENST00000523978 MAP1BP46821 2468 aaKnown RBP3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 FAM208BQ5VWN6 2430 aa3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 TRGV4A0A0C4DH28 118 aa3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 CFAP47Q6ZTR5 3102 aa3.3□□□□□ -1.88
EFCAB13-213ENST00000523978 H0YGX0 51 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 NDUFA4O00483 81 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 NDUFA3O95167 84 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 IGKV3-15P01624 115 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 RNASE3P12724 160 aaKnown RBP3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 ZNF292O60281 2723 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 ZFHX4Q86UP3 3567 aa3.29□□□□□ -1.88
EFCAB13-213ENST00000523978 A0A087WTM6 91 aa3.28□□□□□ -1.88
EFCAB13-213ENST00000523978 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
EFCAB13-213ENST00000523978 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
EFCAB13-213ENST00000523978 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
EFCAB13-213ENST00000523978 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
EFCAB13-213ENST00000523978 CACNA1DQ01668 2161 aa3.27□□□□□ -1.89
EFCAB13-213ENST00000523978 DEFB112Q30KQ8 113 aa3.27□□□□□ -1.89
EFCAB13-213ENST00000523978 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
EFCAB13-213ENST00000523978 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
EFCAB13-213ENST00000523978 SPTBN2O15020 2390 aa3.26□□□□□ -1.89
EFCAB13-213ENST00000523978 IGLV3-19P01714 112 aa3.26□□□□□ -1.89
EFCAB13-213ENST00000523978 COA5Q86WW8 74 aa3.26□□□□□ -1.89
EFCAB13-213ENST00000523978 R4GN34 69 aa3.26□□□□□ -1.89
EFCAB13-213ENST00000523978 RIF1Q5UIP0 2472 aaKnown RBP3.26□□□□□ -1.89
EFCAB13-213ENST00000523978 ZNF462Q96JM2 2506 aa3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 A0A1W2PNN7 141 aa3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 RPL37AP61513 92 aaKnown RBP3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 LY6EQ16553 131 aa3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
EFCAB13-213ENST00000523978 DOCK10Q96BY6 2186 aa3.24□□□□□ -1.89
EFCAB13-213ENST00000523978 GCN1Q92616 2671 aaKnown RBP3.24□□□□□ -1.89
EFCAB13-213ENST00000523978 PTPN13Q12923 2485 aa3.24□□□□□ -1.89
EFCAB13-213ENST00000523978 FAM186AA6NE01 2351 aa3.24□□□□□ -1.89
EFCAB13-213ENST00000523978 HTTP42858 3142 aa3.24□□□□□ -1.89
EFCAB13-213ENST00000523978 ABCA4P78363 2273 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 ABCA12Q86UK0 2595 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 ZFYVE26Q68DK2 2539 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 ETDCA0A1B0GVM5 59 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 C5orf42Q9H799 3197 aa3.23□□□□□ -1.89
EFCAB13-213ENST00000523978 DOPEY1Q5JWR5 2465 aa3.22□□□□□ -1.89
EFCAB13-213ENST00000523978 ASH1LQ9NR48 2969 aaKnown RBP3.22□□□□□ -1.89
EFCAB13-213ENST00000523978 USP24Q9UPU5 2620 aa3.22□□□□□ -1.89
EFCAB13-213ENST00000523978 HAMPP81172 84 aa3.22□□□□□ -1.89
EFCAB13-213ENST00000523978 CCL26Q9Y258 94 aa3.22□□□□□ -1.89
EFCAB13-213ENST00000523978 TRGV2A0A075B6R0 118 aa3.21□□□□□ -1.9
EFCAB13-213ENST00000523978 RPL38P63173 70 aaKnown RBP3.21□□□□□ -1.9
EFCAB13-213ENST00000523978 C5orf56Q8N8D9 126 aa3.21□□□□□ -1.9
EFCAB13-213ENST00000523978 WDFY4Q6ZS81 3184 aa3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 USP34Q70CQ2 3546 aa3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 TRGV1A0A0A0MS02 117 aa3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 IGKV2-29A2NJV5 120 aaPredicted RBP3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 CEP192Q8TEP8 1941 aa3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 CEP250Q9BV73 2442 aa3.2□□□□□ -1.9
EFCAB13-213ENST00000523978 MYO18BQ8IUG5 2567 aa3.19□□□□□ -1.9
EFCAB13-213ENST00000523978 SDK1Q7Z5N4 2213 aa3.19□□□□□ -1.9
EFCAB13-213ENST00000523978 COX7BP24311 80 aa3.19□□□□□ -1.9
EFCAB13-213ENST00000523978 Q96NJ1 140 aa3.19□□□□□ -1.9
EFCAB13-213ENST00000523978 RP1P56715 2156 aa3.19□□□□□ -1.9
EFCAB13-213ENST00000523978 UNC13CQ8NB66 2214 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 A0A1B0GU69 56 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 NCR3O14931 201 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 IGKV4-1P06312 121 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 TFF3Q07654 80 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 C10orf55Q5SWW7 151 aa3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 ANKRD17O75179 2603 aaKnown RBP3.18□□□□□ -1.9
EFCAB13-213ENST00000523978 ITPR3Q14573 2671 aa3.17□□□□□ -1.9
EFCAB13-213ENST00000523978 FREM1Q5H8C1 2179 aa3.17□□□□□ -1.9
EFCAB13-213ENST00000523978 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
EFCAB13-213ENST00000523978 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms