RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 A0A1B0GXF2 115 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 F8VRH5 84 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 H3BRM9 83 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 RPL28P46779 137 aaKnown RBP2.58□□□□□ -2
HDAC2-216ENST00000523628 UBE2D1P51668 147 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 RPL18AQ02543 176 aaKnown RBP2.58□□□□□ -2
HDAC2-216ENST00000523628 COX17Q14061 63 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 MRPL51Q4U2R6 128 aaKnown RBP2.58□□□□□ -2
HDAC2-216ENST00000523628 TMEM136Q6ZRR5 245 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 Q8N8P6 123 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 ORAOV1Q8WV07 137 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 PRELID3AQ96N28 172 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 GEMIN7Q9H840 131 aaKnown RBP2.58□□□□□ -2
HDAC2-216ENST00000523628 D6R8Y8 96 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 H0Y9J4 135 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 FUSP35637 526 aaKnown RBP eCLIP2.57□□□□□ -2
HDAC2-216ENST00000523628 RAB5BP61020 215 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 UBE2BP63146 152 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 C6orf226Q5I0X4 101 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 PPDPFQ9H3Y8 114 aa2.57□□□□□ -2
HDAC2-216ENST00000523628 HERC1Q15751 4861 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
HDAC2-216ENST00000523628 ATP5LO75964 103 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 HAMPP81172 84 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 RHEBQ15382 184 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 NDUFA5Q16718 116 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 C9orf116Q5BN46 136 aaPredicted RBP2.56□□□□□ -2
HDAC2-216ENST00000523628 PDZD11Q5EBL8 140 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 Q6ZUT4 128 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
HDAC2-216ENST00000523628 GNB1LQ9BYB4 327 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 SMCO4Q9NRQ5 59 aa2.56□□□□□ -2
HDAC2-216ENST00000523628 TINCRA0A1B0GVN0 87 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 A0A1B0GWB2 263 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 A8MU10 97 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 M0QXV9 152 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 IGLV7-43P04211 117 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 IFITM2Q01629 132 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 FAM229BQ4G0N7 80 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 C1orf137Q5JT78 98 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 CLLU1Q5K131 121 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 MRPL54Q6P161 138 aaKnown RBP2.55□□□□□ -2
HDAC2-216ENST00000523628 AMELXQ99217 191 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 SEC11CQ9BY50 192 aa2.55□□□□□ -2
HDAC2-216ENST00000523628 ZNF706Q9Y5V0 76 aaPredicted RBP2.55□□□□□ -2
HDAC2-216ENST00000523628 ZNF861PO60384 105 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 NPYP01303 97 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 CHTF8P0CG12 524 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 MT1HL1P0DM35 61 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 C5orf38Q86SI9 138 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 NKAPP1Q8N9T2 125 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 TOMM6Q96B49 74 aa2.54□□□□□ -2
HDAC2-216ENST00000523628 LINC01546A6NGU7 62 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 IGIPA6NJ69 53 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 PANO1I0J062 215 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 BCE1O60756 84 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 SERF1AO75920 110 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 CRYGAP11844 174 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 AKR1D1P51857 326 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 RPL39P62891 51 aaKnown RBP2.53□□□□□ -2
HDAC2-216ENST00000523628 FABP9Q0Z7S8 132 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 PMVKQ15126 192 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 SPAG11AQ6PDA7 123 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 MRPL55Q7Z7F7 128 aaKnown RBP2.53□□□□□ -2
HDAC2-216ENST00000523628 FAM19A2Q8N3H0 131 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 SCGB3A1Q96QR1 104 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 MAP1LC3CQ9BXW4 147 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 C6orf48Q9UBA6 75 aa2.53□□□□□ -2
HDAC2-216ENST00000523628 IGKV2D-26A0A0A0MRZ7 120 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 A0A1B0GVG6 124 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 SMKR1H3BMG3 65 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 KIAA0087Q14695 138 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 LINC00469Q8N7U9 141 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 TOMM7Q9P0U1 55 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 NDUFA12Q9UI09 145 aa2.52□□□□□ -2.01
HDAC2-216ENST00000523628 TMEM218A2RU14 115 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 SNAPINO95295 136 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 HBDP02042 147 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 UBE2AP49459 152 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 UNQ6190/PRO20217Q6UXQ8 127 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 FAM19A5Q7Z5A7 132 aaPredicted RBP2.51□□□□□ -2.01
HDAC2-216ENST00000523628 COMMD7Q86VX2 200 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 SVBPQ8N300 66 aa2.51□□□□□ -2.01
HDAC2-216ENST00000523628 CHCHD1Q96BP2 118 aaKnown RBP2.51□□□□□ -2.01
HDAC2-216ENST00000523628 TRAV12-1A0A0B4J245 112 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 LOC389332A0A1B0GUA5 103 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 A0A1W2PNN7 141 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
HDAC2-216ENST00000523628 JOSD1Q15040 202 aaPredicted RBP2.5□□□□□ -2.01
HDAC2-216ENST00000523628 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 FP248Q71RG6 208 aaPredicted RBP2.5□□□□□ -2.01
HDAC2-216ENST00000523628 CDKN2A-AS1Q9UH64 79 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 C22orf24Q9Y442 160 aa2.5□□□□□ -2.01
HDAC2-216ENST00000523628 LINC00614P0C842 121 aa2.49□□□□□ -2.01
HDAC2-216ENST00000523628 IGLC3P0DOY3 106 aa2.49□□□□□ -2.01
HDAC2-216ENST00000523628 PLNP26678 52 aa2.49□□□□□ -2.01
HDAC2-216ENST00000523628 NMUP48645 174 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms