RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 LINC00469Q8N7U9 141 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
CTNNA1-235ENST00000522730 PRSS2P07478 247 aa6.27□□□□□ -1.41
CTNNA1-235ENST00000522730 KIAA0087Q14695 138 aa6.27□□□□□ -1.41
CTNNA1-235ENST00000522730 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 H3BRM9 83 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 CKS1BP61024 79 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 UBE2BP63146 152 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 C6orf226Q5I0X4 101 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
CTNNA1-235ENST00000522730 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
CTNNA1-235ENST00000522730 SPINK8P0C7L1 97 aa6.25□□□□□ -1.41
CTNNA1-235ENST00000522730 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
CTNNA1-235ENST00000522730 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
CTNNA1-235ENST00000522730 TRBV30A0A0K0K1B3 111 aa6.24□□□□□ -1.41
CTNNA1-235ENST00000522730 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
CTNNA1-235ENST00000522730 M0QXV9 152 aa6.24□□□□□ -1.41
CTNNA1-235ENST00000522730 HERVK_113P61574 105 aa6.24□□□□□ -1.41
CTNNA1-235ENST00000522730 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
CTNNA1-235ENST00000522730 HSBP1L1C9JCN9 74 aa6.23□□□□□ -1.41
CTNNA1-235ENST00000522730 C21orf62-AS1Q17RA5 79 aa6.23□□□□□ -1.41
CTNNA1-235ENST00000522730 KRTAP7-1Q8IUC3 87 aa6.23□□□□□ -1.41
CTNNA1-235ENST00000522730 IGLV5-39A0A0G2JS06 123 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 E9PLD3 99 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 LEPROTO15243 131 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 XP32Q5T750 250 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
CTNNA1-235ENST00000522730 H0Y9J4 135 aa6.21□□□□□ -1.42
CTNNA1-235ENST00000522730 COX7B2Q8TF08 81 aa6.21□□□□□ -1.42
CTNNA1-235ENST00000522730 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
CTNNA1-235ENST00000522730 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
CTNNA1-235ENST00000522730 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
CTNNA1-235ENST00000522730 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
CTNNA1-235ENST00000522730 Q8IZM0 81 aa6.2□□□□□ -1.42
CTNNA1-235ENST00000522730 PAM16Q9Y3D7 125 aa6.2□□□□□ -1.42
CTNNA1-235ENST00000522730 J3QQQ9 107 aa6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 NMUP48645 174 aa6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 S100A12P80511 92 aa6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 SPATA45Q537H7 98 aa6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
CTNNA1-235ENST00000522730 LBHQ53QV2 105 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-235ENST00000522730 CXCL5P42830 114 aa6.17□□□□□ -1.42
CTNNA1-235ENST00000522730 C12orf57Q99622 126 aa6.17□□□□□ -1.42
CTNNA1-235ENST00000522730 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
CTNNA1-235ENST00000522730 NDUFA12Q9UI09 145 aa6.17□□□□□ -1.42
CTNNA1-235ENST00000522730 GAGE10A6NGK3 116 aa6.16□□□□□ -1.42
CTNNA1-235ENST00000522730 RPL37AP8A6NKH3 93 aa6.16□□□□□ -1.42
CTNNA1-235ENST00000522730 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
CTNNA1-235ENST00000522730 LINC00518Q8N0U6 118 aa6.16□□□□□ -1.42
CTNNA1-235ENST00000522730 ZNF625Q96I27 306 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-235ENST00000522730 IGLV1-50A0A075B6I6 118 aa6.15□□□□□ -1.42
CTNNA1-235ENST00000522730 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
CTNNA1-235ENST00000522730 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
CTNNA1-235ENST00000522730 COX8AP10176 69 aa6.15□□□□□ -1.42
CTNNA1-235ENST00000522730 C14orf144Q96I85 54 aa6.15□□□□□ -1.42
CTNNA1-235ENST00000522730 LPAP08519 4548 aa6.15□□□□□ -1.43
CTNNA1-235ENST00000522730 ZNF861PO60384 105 aa6.14□□□□□ -1.43
CTNNA1-235ENST00000522730 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
CTNNA1-235ENST00000522730 HERV-K104P63124 156 aa6.14□□□□□ -1.43
CTNNA1-235ENST00000522730 SFTA2Q6UW10 78 aa6.14□□□□□ -1.43
CTNNA1-235ENST00000522730 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-235ENST00000522730 DLEU1O43261 78 aa6.13□□□□□ -1.43
CTNNA1-235ENST00000522730 PRR4Q16378 134 aa6.13□□□□□ -1.43
CTNNA1-235ENST00000522730 BOD1L2Q8IYS8 172 aa6.13□□□□□ -1.43
CTNNA1-235ENST00000522730 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
CTNNA1-235ENST00000522730 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
CTNNA1-235ENST00000522730 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
CTNNA1-235ENST00000522730 TSPAN13O95857 204 aa6.12□□□□□ -1.43
CTNNA1-235ENST00000522730 PFN2P35080 140 aa6.12□□□□□ -1.43
CTNNA1-235ENST00000522730 SLC25A34Q6PIV7 304 aa6.12□□□□□ -1.43
CTNNA1-235ENST00000522730 PRO1933Q9H354 126 aa6.12□□□□□ -1.43
CTNNA1-235ENST00000522730 BCE1O60756 84 aa6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 RPL28P46779 137 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 SCGB1D4Q6XE38 83 aa6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 ERG28Q9UKR5 140 aa6.11□□□□□ -1.43
CTNNA1-235ENST00000522730 LINC00587B1AMM8 73 aa6.1□□□□□ -1.43
CTNNA1-235ENST00000522730 ANAPC11Q9NYG5 84 aa6.1□□□□□ -1.43
CTNNA1-235ENST00000522730 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
CTNNA1-235ENST00000522730 A0A0U1RRA0 63 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 TIMM17BO60830 172 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 UBE2AP49459 152 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 COX17Q14061 63 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 LITAFQ99732 161 aa6.09□□□□□ -1.43
CTNNA1-235ENST00000522730 IGKV2-28A0A075B6P5 120 aa6.08□□□□□ -1.44
CTNNA1-235ENST00000522730 TSTD3H0UI37 97 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms