RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KRTAP10-2P60368 255 aa13.74□□□□□ -0.21
R3HCC1-208ENST00000522012 LOC107984156A0A0G2JMH3 177 aa13.73□□□□□ -0.21
R3HCC1-208ENST00000522012 ARL17AQ8IVW1 177 aa13.73□□□□□ -0.21
R3HCC1-208ENST00000522012 PKIGQ9Y2B9 76 aa13.73□□□□□ -0.21
R3HCC1-208ENST00000522012 DNAH17Q9UFH2 4485 aa13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 TMEM238LA0A1B0GVL6 79 aa13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 A6NJY4 79 aa13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 C9orf129Q5T035 196 aaKnown RBP13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 SDIM1Q6ZPB5 146 aa13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 PPDPFQ9H3Y8 114 aa13.72□□□□□ -0.21
R3HCC1-208ENST00000522012 A0A096LNI7 61 aa13.71□□□□□ -0.21
R3HCC1-208ENST00000522012 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
R3HCC1-208ENST00000522012 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.21
R3HCC1-208ENST00000522012 C16orf90A8MZG2 172 aa13.7□□□□□ -0.22
R3HCC1-208ENST00000522012 SNHG12Q9BXW3 62 aa13.7□□□□□ -0.22
R3HCC1-208ENST00000522012 NHP2Q9NX24 153 aaKnown RBP13.69□□□□□ -0.22
R3HCC1-208ENST00000522012 CHTF8P0CG12 524 aa13.67□□□□□ -0.22
R3HCC1-208ENST00000522012 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
R3HCC1-208ENST00000522012 Q8NDZ9 215 aa13.67□□□□□ -0.22
R3HCC1-208ENST00000522012 A6NDN8 102 aa13.66□□□□□ -0.22
R3HCC1-208ENST00000522012 CFC1BP0CG36 223 aa13.66□□□□□ -0.22
R3HCC1-208ENST00000522012 CFC1P0CG37 223 aa13.66□□□□□ -0.22
R3HCC1-208ENST00000522012 NDUFC2O95298 119 aa13.65□□□□□ -0.22
R3HCC1-208ENST00000522012 K7ERJ3 54 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 FRAS1Q86XX4 4008 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 FAM168BA1KXE4 195 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 NCR3O14931 201 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 DPH3Q96FX2 82 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 LINC00474Q9P2X8 69 aa13.64□□□□□ -0.23
R3HCC1-208ENST00000522012 IGKV2-28A0A075B6P5 120 aa13.63□□□□□ -0.23
R3HCC1-208ENST00000522012 IGKV2D-28P01615 120 aa13.63□□□□□ -0.23
R3HCC1-208ENST00000522012 SERTAD4-AS1Q5TG53 156 aa13.63□□□□□ -0.23
R3HCC1-208ENST00000522012 VPREB1P12018 145 aa13.62□□□□□ -0.23
R3HCC1-208ENST00000522012 A0A0B4J2C4 111 aa13.61□□□□□ -0.23
R3HCC1-208ENST00000522012 A0A1B0GWB2 263 aa13.61□□□□□ -0.23
R3HCC1-208ENST00000522012 PLA2G2DQ9UNK4 145 aa13.61□□□□□ -0.23
R3HCC1-208ENST00000522012 PANO1I0J062 215 aa13.6□□□□□ -0.23
R3HCC1-208ENST00000522012 FAM19A5Q7Z5A7 132 aaPredicted RBP13.6□□□□□ -0.23
R3HCC1-208ENST00000522012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.6□□□□□ -0.23
R3HCC1-208ENST00000522012 A0A1B0GVY2 172 aa13.59□□□□□ -0.23
R3HCC1-208ENST00000522012 NKAPP1Q8N9T2 125 aa13.59□□□□□ -0.23
R3HCC1-208ENST00000522012 LINC00337Q8N6G1 96 aa13.59□□□□□ -0.23
R3HCC1-208ENST00000522012 OR13C6PQ8NH95 151 aa13.59□□□□□ -0.23
R3HCC1-208ENST00000522012 PRO1854Q9UHT4 67 aa13.59□□□□□ -0.23
R3HCC1-208ENST00000522012 TRAV13-2A0A0B4J235 113 aa13.58□□□□□ -0.24
R3HCC1-208ENST00000522012 A0A1W2PNN7 141 aa13.58□□□□□ -0.24
R3HCC1-208ENST00000522012 SPACA4Q8TDM5 124 aa13.58□□□□□ -0.24
R3HCC1-208ENST00000522012 FAT2Q9NYQ8 4349 aa13.58□□□□□ -0.24
R3HCC1-208ENST00000522012 COL5A1-AS1Q5SY13 56 aa13.57□□□□□ -0.24
R3HCC1-208ENST00000522012 KRTAP7-1Q8IUC3 87 aa13.57□□□□□ -0.24
R3HCC1-208ENST00000522012 TRBV10-2A0A0K0K1G8 114 aa13.56□□□□□ -0.24
R3HCC1-208ENST00000522012 M0R378 163 aa13.56□□□□□ -0.24
R3HCC1-208ENST00000522012 H7C2G1 150 aa13.55□□□□□ -0.24
R3HCC1-208ENST00000522012 RPL13AP40429 203 aaKnown RBP13.55□□□□□ -0.24
R3HCC1-208ENST00000522012 KRTAP10-1P60331 282 aa13.55□□□□□ -0.24
R3HCC1-208ENST00000522012 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
R3HCC1-208ENST00000522012 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
R3HCC1-208ENST00000522012 IGLV5-37A0A075B6J1 123 aa13.54□□□□□ -0.24
R3HCC1-208ENST00000522012 GAGE10A6NGK3 116 aa13.53□□□□□ -0.24
R3HCC1-208ENST00000522012 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.25
R3HCC1-208ENST00000522012 M0QXV9 152 aa13.52□□□□□ -0.25
R3HCC1-208ENST00000522012 C7orf33Q8WU49 177 aa13.52□□□□□ -0.25
R3HCC1-208ENST00000522012 A0A087WYN8 130 aa13.51□□□□□ -0.25
R3HCC1-208ENST00000522012 Q1RN00 199 aa13.51□□□□□ -0.25
R3HCC1-208ENST00000522012 KRTAP17-1Q9BYP8 105 aa13.51□□□□□ -0.25
R3HCC1-208ENST00000522012 TMEM126AQ9H061 195 aa13.51□□□□□ -0.25
R3HCC1-208ENST00000522012 MRPL55Q7Z7F7 128 aaKnown RBP13.5□□□□□ -0.25
R3HCC1-208ENST00000522012 FAM30AQ9NZY2 134 aa13.5□□□□□ -0.25
R3HCC1-208ENST00000522012 TRBV10-3A0A0K0K1G6 114 aa13.49□□□□□ -0.25
R3HCC1-208ENST00000522012 TAX1BP3O14907 124 aa13.49□□□□□ -0.25
R3HCC1-208ENST00000522012 TSPAN13O95857 204 aa13.49□□□□□ -0.25
R3HCC1-208ENST00000522012 IGLV6-57P01721 117 aa13.49□□□□□ -0.25
R3HCC1-208ENST00000522012 LINC00167Q96N53 147 aa13.49□□□□□ -0.25
R3HCC1-208ENST00000522012 RPL37AP8A6NKH3 93 aa13.47□□□□□ -0.25
R3HCC1-208ENST00000522012 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
R3HCC1-208ENST00000522012 PHF5AQ7RTV0 110 aaKnown RBP13.47□□□□□ -0.25
R3HCC1-208ENST00000522012 NAA38Q9BRA0 125 aaKnown RBP13.47□□□□□ -0.25
R3HCC1-208ENST00000522012 HECTD4Q9Y4D8 3996 aa13.46□□□□□ -0.25
R3HCC1-208ENST00000522012 PKD1P98161 4303 aa13.46□□□□□ -0.25
R3HCC1-208ENST00000522012 PLAC8Q9NZF1 115 aa13.46□□□□□ -0.25
R3HCC1-208ENST00000522012 SMIM11BQ8TCY0 68 aa13.45□□□□□ -0.26
R3HCC1-208ENST00000522012 Q6ZSA8 131 aa13.44□□□□□ -0.26
R3HCC1-208ENST00000522012 C9orf118A6NHY6 69 aa13.44□□□□□ -0.26
R3HCC1-208ENST00000522012 EPM2AB3EWF7 344 aa13.44□□□□□ -0.26
R3HCC1-208ENST00000522012 PSMB2P49721 201 aa13.44□□□□□ -0.26
R3HCC1-208ENST00000522012 IGLV1-50A0A075B6I6 118 aa13.43□□□□□ -0.26
R3HCC1-208ENST00000522012 H3BUT2 72 aa13.43□□□□□ -0.26
R3HCC1-208ENST00000522012 TRAV23DV6A0A075B6W5 121 aa13.42□□□□□ -0.26
R3HCC1-208ENST00000522012 HERC2O95714 4834 aa13.41□□□□□ -0.26
R3HCC1-208ENST00000522012 UBE2BP63146 152 aa13.41□□□□□ -0.26
R3HCC1-208ENST00000522012 CIRBP-AS1Q8TBR5 109 aa13.41□□□□□ -0.26
R3HCC1-208ENST00000522012 RPL28P46779 137 aaKnown RBP13.4□□□□□ -0.26
R3HCC1-208ENST00000522012 CBY1Q9Y3M2 126 aa13.4□□□□□ -0.26
R3HCC1-208ENST00000522012 HAMPP81172 84 aa13.39□□□□□ -0.27
R3HCC1-208ENST00000522012 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
R3HCC1-208ENST00000522012 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
R3HCC1-208ENST00000522012 TRIAP1O43715 76 aa13.39□□□□□ -0.27
R3HCC1-208ENST00000522012 KCNQ1DNQ9H478 68 aa13.39□□□□□ -0.27
R3HCC1-208ENST00000522012 C6orf99Q4VX62 202 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms