RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 FAM19A3Q7Z5A8 133 aa8.79□□□□□ -1
PRKDC-204ENST00000521331 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
PRKDC-204ENST00000521331 Q8N8P6 123 aa8.79□□□□□ -1
PRKDC-204ENST00000521331 A0A087X002 238 aa8.78□□□□□ -1
PRKDC-204ENST00000521331 F8VRH5 84 aa8.78□□□□□ -1
PRKDC-204ENST00000521331 BCE1O60756 84 aa8.78□□□□□ -1
PRKDC-204ENST00000521331 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
PRKDC-204ENST00000521331 K7EMI3 77 aa8.77□□□□□ -1.01
PRKDC-204ENST00000521331 CXCL5P42830 114 aa8.77□□□□□ -1.01
PRKDC-204ENST00000521331 HERVK_113P63121 156 aa8.77□□□□□ -1.01
PRKDC-204ENST00000521331 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
PRKDC-204ENST00000521331 PAM16Q9Y3D7 125 aa8.77□□□□□ -1.01
PRKDC-204ENST00000521331 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
PRKDC-204ENST00000521331 SPATA45Q537H7 98 aa8.76□□□□□ -1.01
PRKDC-204ENST00000521331 KRTAP9-2Q9BYQ4 174 aa8.76□□□□□ -1.01
PRKDC-204ENST00000521331 KRTDAPP60985 99 aa8.75□□□□□ -1.01
PRKDC-204ENST00000521331 CHCHD1Q96BP2 118 aaKnown RBP8.75□□□□□ -1.01
PRKDC-204ENST00000521331 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
PRKDC-204ENST00000521331 CDKN2A-AS1Q9UH64 79 aa8.75□□□□□ -1.01
PRKDC-204ENST00000521331 G0S2P27469 103 aa8.74□□□□□ -1.01
PRKDC-204ENST00000521331 KIAA1644Q3SXP7 199 aa8.73□□□□□ -1.01
PRKDC-204ENST00000521331 URB1-AS1Q96HZ7 61 aa8.73□□□□□ -1.01
PRKDC-204ENST00000521331 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
PRKDC-204ENST00000521331 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
PRKDC-204ENST00000521331 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
PRKDC-204ENST00000521331 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
PRKDC-204ENST00000521331 HSBP1O75506 76 aa8.71□□□□□ -1.02
PRKDC-204ENST00000521331 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
PRKDC-204ENST00000521331 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 UBE2AP49459 152 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 TOMM6Q96B49 74 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
PRKDC-204ENST00000521331 GAGE10A6NGK3 116 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
PRKDC-204ENST00000521331 TINCRA0A1B0GVN0 87 aa8.67□□□□□ -1.02
PRKDC-204ENST00000521331 ERASQ7Z444 233 aa8.67□□□□□ -1.02
PRKDC-204ENST00000521331 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
PRKDC-204ENST00000521331 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
PRKDC-204ENST00000521331 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
PRKDC-204ENST00000521331 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
PRKDC-204ENST00000521331 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
PRKDC-204ENST00000521331 UBE2V1Q13404 147 aa8.65□□□□□ -1.02
PRKDC-204ENST00000521331 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
PRKDC-204ENST00000521331 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
PRKDC-204ENST00000521331 CDIP1Q9H305 208 aa8.65□□□□□ -1.02
PRKDC-204ENST00000521331 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 LINC01549A6NIU2 74 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 HSPB8Q9UJY1 196 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 FAT4Q6V0I7 4981 aa8.64□□□□□ -1.03
PRKDC-204ENST00000521331 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
PRKDC-204ENST00000521331 IGKV2-28A0A075B6P5 120 aa8.62□□□□□ -1.03
PRKDC-204ENST00000521331 ATP5LO75964 103 aa8.62□□□□□ -1.03
PRKDC-204ENST00000521331 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
PRKDC-204ENST00000521331 IGKV2D-28P01615 120 aa8.62□□□□□ -1.03
PRKDC-204ENST00000521331 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
PRKDC-204ENST00000521331 BATFQ16520 125 aa8.61□□□□□ -1.03
PRKDC-204ENST00000521331 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
PRKDC-204ENST00000521331 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
PRKDC-204ENST00000521331 MUC17Q685J3 4493 aa8.6□□□□□ -1.03
PRKDC-204ENST00000521331 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
PRKDC-204ENST00000521331 H3BRM9 83 aa8.6□□□□□ -1.03
PRKDC-204ENST00000521331 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
PRKDC-204ENST00000521331 PRLHP81277 87 aa8.59□□□□□ -1.03
PRKDC-204ENST00000521331 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
PRKDC-204ENST00000521331 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
PRKDC-204ENST00000521331 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
PRKDC-204ENST00000521331 COX8AP10176 69 aa8.58□□□□□ -1.04
PRKDC-204ENST00000521331 HINT1P49773 126 aaPredicted RBP8.58□□□□□ -1.04
PRKDC-204ENST00000521331 PMVKQ15126 192 aa8.58□□□□□ -1.04
PRKDC-204ENST00000521331 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
PRKDC-204ENST00000521331 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
PRKDC-204ENST00000521331 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
PRKDC-204ENST00000521331 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
PRKDC-204ENST00000521331 VPREB1P12018 145 aa8.57□□□□□ -1.04
PRKDC-204ENST00000521331 PFN2P35080 140 aa8.57□□□□□ -1.04
PRKDC-204ENST00000521331 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
PRKDC-204ENST00000521331 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
PRKDC-204ENST00000521331 A0A096LNJ9 63 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 COX17Q14061 63 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
PRKDC-204ENST00000521331 M0R378 163 aa8.54□□□□□ -1.04
PRKDC-204ENST00000521331 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
PRKDC-204ENST00000521331 ERG28Q9UKR5 140 aa8.54□□□□□ -1.04
PRKDC-204ENST00000521331 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
PRKDC-204ENST00000521331 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
PRKDC-204ENST00000521331 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms