RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CRYGAP11844 174 aa3.36□□□□□ -1.87
PABPC1-216ENST00000520868 RAB5AP20339 215 aa3.36□□□□□ -1.87
PABPC1-216ENST00000520868 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
PABPC1-216ENST00000520868 ADIRFQ15847 76 aa3.36□□□□□ -1.87
PABPC1-216ENST00000520868 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
PABPC1-216ENST00000520868 MRPL54Q6P161 138 aaKnown RBP3.36□□□□□ -1.87
PABPC1-216ENST00000520868 TCTE3Q8IZS6 198 aa3.36□□□□□ -1.87
PABPC1-216ENST00000520868 LOC389332A0A1B0GUA5 103 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 SMIM27A0A1W2PRY6 76 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
PABPC1-216ENST00000520868 CKS1BP61024 79 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 Q6ZN92 141 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 TEX43Q6ZNM6 134 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
PABPC1-216ENST00000520868 A0A1B0GW15 77 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 F8W036 122 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 BCE1O60756 84 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 KRTAP13-2Q52LG2 175 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 TMEM136Q6ZRR5 245 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
PABPC1-216ENST00000520868 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 PRELID3AQ96N28 172 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 VCX2Q9H322 139 aa3.34□□□□□ -1.87
PABPC1-216ENST00000520868 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 PPBPP02775 128 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 S100A8P05109 93 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 PET117Q6UWS5 81 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 ORMDL3Q8N138 153 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 C2orf88Q9BSF0 95 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 NAT8Q9UHE5 227 aa3.33□□□□□ -1.88
PABPC1-216ENST00000520868 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 C9JQL5 133 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 UBE2AP49459 152 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 RAB5BP61020 215 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 CXCL6P80162 114 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 Q8IZM0 81 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 AMELXQ99217 191 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 TP73-AS1Q9UF72 201 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
PABPC1-216ENST00000520868 IGKV2D-26A0A0A0MRZ7 120 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 F8VRH5 84 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 SCO1O75880 301 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 Q8N8P6 123 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 GEMIN7Q9H840 131 aaKnown RBP3.31□□□□□ -1.88
PABPC1-216ENST00000520868 CDKN2A-AS1Q9UH64 79 aa3.31□□□□□ -1.88
PABPC1-216ENST00000520868 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 IGIPA6NJ69 53 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 HERVK_113P63121 156 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 FAM229BQ4G0N7 80 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 AKAP14Q86UN6 197 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 NKAPP1Q8N9T2 125 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 PPDPFQ9H3Y8 114 aa3.3□□□□□ -1.88
PABPC1-216ENST00000520868 CXCL5P42830 114 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 SEC11AP67812 179 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 PRLHP81277 87 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 PEA15Q15121 130 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 ATP5L2Q7Z4Y8 100 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 C3orf22Q8N5N4 141 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
PABPC1-216ENST00000520868 SPINK8P0C7L1 97 aa3.28□□□□□ -1.88
PABPC1-216ENST00000520868 LINC00337Q8N6G1 96 aa3.28□□□□□ -1.88
PABPC1-216ENST00000520868 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
PABPC1-216ENST00000520868 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 PFN2P35080 140 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 PDZD11Q5EBL8 140 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 CBLN2Q8IUK8 224 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 PLEKHB2Q96CS7 222 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 TMEM126AQ9H061 195 aa3.27□□□□□ -1.89
PABPC1-216ENST00000520868 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 K7EMI3 77 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 ADCYAP1P18509 176 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 RAB14P61106 215 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 ERASQ7Z444 233 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 TOMM6Q96B49 74 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 HIGD2AQ9BW72 106 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
PABPC1-216ENST00000520868 NXT2Q9NPJ8 142 aaKnown RBP3.26□□□□□ -1.89
PABPC1-216ENST00000520868 M0R378 163 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 ATP5LO75964 103 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 G0S2P27469 103 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 CTAG1AP78358 180 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 SPAG11AQ6PDA7 123 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 DAND5Q8N907 189 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
PABPC1-216ENST00000520868 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
PABPC1-216ENST00000520868 FP248Q71RG6 208 aaPredicted RBP3.24□□□□□ -1.89
PABPC1-216ENST00000520868 ZNF625Q96I27 306 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms