RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	INAFM2	P0DMQ5	153 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	RAB5B	P61020	215 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	SEC11A	P67812	179 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	CIRBP	Q14011	172 aa	Known RBP	4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228		Q6ZRU5	148 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	C18orf32	Q8TCD1	76 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	SPACA4	Q8TDM5	124 aa		4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	GEMIN7	Q9H840	131 aa	Known RBP	4.25	□□□□□ -1.73
SDCBP-208	ENST00000520228	IGKV2-24	A0A0C4DH68	120 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	HERVK_113	P63121	156 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	MAJIN	Q3KP22	176 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	CST9L	Q9H4G1	147 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	LINC00474	Q9P2X8	69 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	FAT1	Q14517	4588 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228	ABCA13	Q86UQ4	5058 aa		4.24	□□□□□ -1.73
SDCBP-208	ENST00000520228		A0A096LNI7	61 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228		A0A0J9YXV3	536 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228		A0A0J9YXY3	114 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	LOC107984640	A0A0U1RRK4	108 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	NDUFA1	O15239	70 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	HBD	P02042	147 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	PMVK	Q15126	192 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	PMCHL1	Q16048	86 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228	FAM19A3	Q7Z5A8	133 aa		4.23	□□□□□ -1.73
SDCBP-208	ENST00000520228		A0A096LNJ9	63 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	TINCR	A0A1B0GVN0	87 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	TRGC2	P03986	189 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	NDUFA6	P56556	154 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	RPL37A	P61513	92 aa	Known RBP	4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	KIAA0087	Q14695	138 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	C6orf226	Q5I0X4	101 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	LINC00469	Q8N7U9	141 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	CHCHD1	Q96BP2	118 aa	Known RBP	4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	PACRG	Q96M98	296 aa	Predicted RBP	4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	MRPL35	Q9NZE8	188 aa	Known RBP	4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	PLAC8	Q9NZF1	115 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	CDKN2A-AS1	Q9UH64	79 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	DNAH8	Q96JB1	4490 aa		4.22	□□□□□ -1.73
SDCBP-208	ENST00000520228	COLCA2	A8K830	154 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	ATP5L	O75964	103 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	CKS1B	P61024	79 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	RPL18A	Q02543	176 aa	Known RBP	4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	PDZD11	Q5EBL8	140 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	C2orf82	Q6UX34	121 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	BAGE3	Q86Y29	109 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	TOMM7	Q9P0U1	55 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	C6orf48	Q9UBA6	75 aa		4.21	□□□□□ -1.74
SDCBP-208	ENST00000520228	TRBV30	A0A0K0K1B3	111 aa		4.2	□□□□□ -1.74
SDCBP-208	ENST00000520228		H3BRM9	83 aa		4.2	□□□□□ -1.74
SDCBP-208	ENST00000520228	KRTAP10-4	P60372	401 aa	Predicted RBP	4.2	□□□□□ -1.74
SDCBP-208	ENST00000520228		Q8IZM0	81 aa		4.2	□□□□□ -1.74
SDCBP-208	ENST00000520228	MTURN	Q8N3F0	131 aa		4.2	□□□□□ -1.74
SDCBP-208	ENST00000520228	HSBP1	O75506	76 aa		4.19	□□□□□ -1.74
SDCBP-208	ENST00000520228	TLX1NB	P0CAT3	122 aa		4.19	□□□□□ -1.74
SDCBP-208	ENST00000520228	IGLC3	P0DOY3	106 aa		4.19	□□□□□ -1.74
SDCBP-208	ENST00000520228		A0A1W2PNN7	141 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	NDUFC2-KCTD14	E9PQ53	114 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228		F8VRH5	84 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	SCO1	O75880	301 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	SPINK8	P0C7L1	97 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	C9orf116	Q5BN46	136 aa	Predicted RBP	4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228		Q6ZVH6	145 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	FAM19A2	Q8N3H0	131 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	NKAPP1	Q8N9T2	125 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	COX7B2	Q8TF08	81 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	IFI27L1	Q96BM0	104 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	LINC00167	Q96N53	147 aa		4.18	□□□□□ -1.74
SDCBP-208	ENST00000520228	FLG2	Q5D862	2391 aa	Predicted RBP	4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	ZNF22	P17026	224 aa	Predicted RBP	4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	S100A1	P23297	94 aa		4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	CXCL5	P42830	114 aa		4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	TMEM170B	Q5T4T1	132 aa		4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.17	□□□□□ -1.74
SDCBP-208	ENST00000520228	TRAV12-1	A0A0B4J245	112 aa		4.16	□□□□□ -1.74
SDCBP-208	ENST00000520228	C11orf86	A6NJI1	115 aa		4.16	□□□□□ -1.74
SDCBP-208	ENST00000520228	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.16	□□□□□ -1.74
SDCBP-208	ENST00000520228	VPS13B	Q7Z7G8	4022 aa		4.16	□□□□□ -1.74
SDCBP-208	ENST00000520228	HERC1	Q15751	4861 aa		4.15	□□□□□ -1.74
SDCBP-208	ENST00000520228	NUPR1	O60356	82 aa		4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	LEPROTL1	O95214	131 aa		4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	FABP4	P15090	132 aa		4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	PRR3	P79522	188 aa	Known RBP	4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	KRTAP5-1	Q6L8H4	278 aa		4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	PHF5A	Q7RTV0	110 aa	Known RBP	4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	HSPB8	Q9UJY1	196 aa		4.15	□□□□□ -1.75
SDCBP-208	ENST00000520228	UBR4	Q5T4S7	5183 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	MYCBP2	O75592	4640 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228		H0Y8G0	127 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BK	O60814	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BJ	P06899	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BO	P23527	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BB	P33778	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BD	P58876	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BC	P62807	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST2H2BE	Q16778	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.14	□□□□□ -1.75

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