RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 Q6ZTI0 123 aa2.32□□□□□ -2.04
CSMD3-209ENST00000519485 TM2D3Q9BRN9 247 aa2.32□□□□□ -2.04
CSMD3-209ENST00000519485 NOP10Q9NPE3 64 aaKnown RBP2.32□□□□□ -2.04
CSMD3-209ENST00000519485 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
CSMD3-209ENST00000519485 CACNA1BQ00975 2339 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 ATRXP46100 2492 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 ZNF73O43830 326 aaPredicted RBP2.31□□□□□ -2.04
CSMD3-209ENST00000519485 ATP11AUNQ6ZP68 121 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 DEFB123Q8N688 67 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 CSNK1G2-AS1Q8NCQ2 148 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 DHRS4-AS1Q9P1J3 65 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 LINC00474Q9P2X8 69 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 UNC80Q8N2C7 3258 aa2.31□□□□□ -2.04
CSMD3-209ENST00000519485 TECTAO75443 2155 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 DNAH14Q0VDD8 3507 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 IGLV4-60A0A075B6I1 120 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 LCE6AA0A183 80 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 RPL37AP8A6NKH3 93 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 HCG22E2RYF7 251 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 IGKV4-1P06312 121 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 DEFB112Q30KQ8 113 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
CSMD3-209ENST00000519485 Q9UF83 564 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 CELA1Q9UNI1 258 aa2.3□□□□□ -2.04
CSMD3-209ENST00000519485 A0A096LNT2 108 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 ANGP03950 147 aaKnown RBP2.29□□□□□ -2.04
CSMD3-209ENST00000519485 REG3AQ06141 175 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 EGFEM1PQ0D2K5 195 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 KIAA0087Q14695 138 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 ZNF702PQ9H963 129 aa2.29□□□□□ -2.04
CSMD3-209ENST00000519485 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
CSMD3-209ENST00000519485 MKI67P46013 3256 aaKnown RBP2.28□□□□□ -2.04
CSMD3-209ENST00000519485 IGLV5-48A0A075B6I7 105 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 TRAV22A0A0B4J277 110 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 PHF5AQ7RTV0 110 aaKnown RBP2.28□□□□□ -2.04
CSMD3-209ENST00000519485 LINC00269Q8N2A0 174 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 Q9BRP9 147 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 HIGD2AQ9BW72 106 aa2.28□□□□□ -2.04
CSMD3-209ENST00000519485 TPRP12270 2363 aaKnown RBP2.28□□□□□ -2.05
CSMD3-209ENST00000519485 POLEQ07864 2286 aa2.28□□□□□ -2.05
CSMD3-209ENST00000519485 PKDREJQ9NTG1 2253 aa2.28□□□□□ -2.05
CSMD3-209ENST00000519485 CHKB-CPT1BH3BT56 60 aa2.27□□□□□ -2.05
CSMD3-209ENST00000519485 PSCAO43653 123 aa2.27□□□□□ -2.05
CSMD3-209ENST00000519485 PRR3P79522 188 aaKnown RBP2.27□□□□□ -2.05
CSMD3-209ENST00000519485 KPRPQ5T749 579 aaPredicted RBP2.27□□□□□ -2.05
CSMD3-209ENST00000519485 LELP1Q5T871 98 aa2.27□□□□□ -2.05
CSMD3-209ENST00000519485 NKAPP1Q8N9T2 125 aa2.27□□□□□ -2.05
CSMD3-209ENST00000519485 ROS1P08922 2347 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 DOPEY2Q9Y3R5 2298 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 CEP290O15078 2479 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 PIEZO2Q9H5I5 2752 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 DEFB130BP0DP73 79 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 DEFB130AP0DP74 79 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 APOC4P55056 127 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 ASB16-AS1Q495Z4 193 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 UNQ6190/PRO20217Q6UXQ8 127 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 ZCCHC13Q8WW36 166 aaKnown RBP2.26□□□□□ -2.05
CSMD3-209ENST00000519485 LINC00208Q96KT6 92 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 CAMK2N2Q96S95 79 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 KCNQ1DNQ9H478 68 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 RETNQ9HD89 108 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 SZT2Q5T011 3432 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 ANKHD1Q8IWZ3 2542 aaKnown RBP2.26□□□□□ -2.05
CSMD3-209ENST00000519485 CEP250Q9BV73 2442 aa2.26□□□□□ -2.05
CSMD3-209ENST00000519485 TNRC18O15417 2968 aaPredicted RBP2.25□□□□□ -2.05
CSMD3-209ENST00000519485 LAMA2P24043 3122 aaKnown RBP2.25□□□□□ -2.05
CSMD3-209ENST00000519485 LAMA1P25391 3075 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.25□□□□□ -2.05
CSMD3-209ENST00000519485 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 H3BNG1 76 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 PSPHP1O15172 72 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 IGLV1-51P01701 117 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 PRM2P04554 102 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 SYCNQ0VAF6 134 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 C1orf137Q5JT78 98 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 LINC01006Q8NI28 216 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 WFDC10AQ9H1F0 79 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
CSMD3-209ENST00000519485 MAP1BP46821 2468 aaKnown RBP2.25□□□□□ -2.05
CSMD3-209ENST00000519485 RP1L1Q8IWN7 2480 aaPredicted RBP2.25□□□□□ -2.05
CSMD3-209ENST00000519485 A6NED7 52 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 C19orf84I3L1E1 186 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 SPART-AS1P0CW21 52 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 DEFB136Q30KP8 78 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 C10orf99Q6UWK7 81 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 C7orf65Q6ZTY9 151 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 LCA10Q71F78 164 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 TP53AIP1Q9HCN2 124 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 LINC00588Q9Y4M8 146 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 REV3LO60673 3130 aa2.24□□□□□ -2.05
CSMD3-209ENST00000519485 SPTBN2O15020 2390 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms