RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 ADCYAP1P18509 176 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 UBE2AP49459 152 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 HERVK_113P63121 156 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 SEC11AP67812 179 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 Q8N8P6 123 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 SEC11CQ9BY50 192 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 TOMM7Q9P0U1 55 aa4.34□□□□□ -1.71
CDKL3-203ENST00000519312 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
CDKL3-203ENST00000519312 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
CDKL3-203ENST00000519312 NXT2Q9NPJ8 142 aaKnown RBP4.33□□□□□ -1.72
CDKL3-203ENST00000519312 CYSLTR1Q9Y271 337 aa4.33□□□□□ -1.72
CDKL3-203ENST00000519312 S100PP25815 95 aa4.32□□□□□ -1.72
CDKL3-203ENST00000519312 G0S2P27469 103 aa4.32□□□□□ -1.72
CDKL3-203ENST00000519312 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
CDKL3-203ENST00000519312 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
CDKL3-203ENST00000519312 VCX2Q9H322 139 aa4.32□□□□□ -1.72
CDKL3-203ENST00000519312 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
CDKL3-203ENST00000519312 IGLV5-45A0A087WSX0 123 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 COX19Q49B96 90 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 COMMD7Q86VX2 200 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 PLEKHB2Q96CS7 222 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
CDKL3-203ENST00000519312 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 LINC01549A6NIU2 74 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 PDZD11Q5EBL8 140 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 C10orf91Q5T1B1 145 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 NKAPP1Q8N9T2 125 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
CDKL3-203ENST00000519312 PRLHP81277 87 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 RHEBQ15382 184 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 TOMM6Q96B49 74 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
CDKL3-203ENST00000519312 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
CDKL3-203ENST00000519312 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 M0R378 163 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 VPREB1P12018 145 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 RPS29P62273 56 aaKnown RBP4.28□□□□□ -1.72
CDKL3-203ENST00000519312 ERASQ7Z444 233 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 COX7B2Q8TF08 81 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
CDKL3-203ENST00000519312 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 SPINK1P00995 79 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 FABP9Q0Z7S8 132 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 SCGB3A1Q96QR1 104 aa4.27□□□□□ -1.73
CDKL3-203ENST00000519312 PCP4P48539 62 aa4.26□□□□□ -1.73
CDKL3-203ENST00000519312 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
CDKL3-203ENST00000519312 SMCO4Q9NRQ5 59 aa4.26□□□□□ -1.73
CDKL3-203ENST00000519312 ZNF706Q9Y5V0 76 aaPredicted RBP4.26□□□□□ -1.73
CDKL3-203ENST00000519312 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 SCO1O75880 301 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 ATP5LO75964 103 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 SNAPINO95295 136 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 MT1HP80294 61 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
CDKL3-203ENST00000519312 NDUFA5Q16718 116 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 FAM19A2Q8N3H0 131 aa4.25□□□□□ -1.73
CDKL3-203ENST00000519312 APOC3P02656 99 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 COX17Q14061 63 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 PMVKQ15126 192 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 SVBPQ8N300 66 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 DAND5Q8N907 189 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 Q8NBF4 154 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 NDUFA12Q9UI09 145 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 TRAPPC1Q9Y5R8 145 aa4.24□□□□□ -1.73
CDKL3-203ENST00000519312 LINC00614P0C842 121 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 RAB5BP61020 215 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 Q8N377 158 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 Q8NDZ9 215 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 HIGD2AQ9BW72 106 aa4.23□□□□□ -1.73
CDKL3-203ENST00000519312 SPRR1AP35321 89 aa4.22□□□□□ -1.73
CDKL3-203ENST00000519312 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
CDKL3-203ENST00000519312 ERG28Q9UKR5 140 aa4.22□□□□□ -1.73
CDKL3-203ENST00000519312 A0A096LNJ9 63 aa4.21□□□□□ -1.74
CDKL3-203ENST00000519312 H3BRM9 83 aa4.21□□□□□ -1.74
CDKL3-203ENST00000519312 HBDP02042 147 aa4.21□□□□□ -1.74
CDKL3-203ENST00000519312 SPINK8P0C7L1 97 aa4.21□□□□□ -1.74
CDKL3-203ENST00000519312 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
CDKL3-203ENST00000519312 SLC25A20O43772 301 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms