RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 COX19Q49B96 90 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 SMCO4Q9NRQ5 59 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 C11orf86A6NJI1 115 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 LINC00614P0C842 121 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 CXCL5P42830 114 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 RAB5BP61020 215 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 Q8NDZ9 215 aa4.76□□□□□ -1.65
CTNNA1-215ENST00000519309 IGKV2D-26A0A0A0MRZ7 120 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 GAGE10A6NGK3 116 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 RPL37AP8A6NKH3 93 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 HBDP02042 147 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 NDUFA6P56556 154 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 MT1HP80294 61 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 LINC00167Q96N53 147 aa4.75□□□□□ -1.65
CTNNA1-215ENST00000519309 LINC01549A6NIU2 74 aa4.74□□□□□ -1.65
CTNNA1-215ENST00000519309 CBLN2Q8IUK8 224 aa4.74□□□□□ -1.65
CTNNA1-215ENST00000519309 SVBPQ8N300 66 aa4.74□□□□□ -1.65
CTNNA1-215ENST00000519309 LINC00337Q8N6G1 96 aa4.74□□□□□ -1.65
CTNNA1-215ENST00000519309 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 SNAPINO95295 136 aa4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 PFN2P35080 140 aa4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 SPAG11AQ6PDA7 123 aa4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 BAGE3Q86Y29 109 aa4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 ZNF625Q96I27 306 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-215ENST00000519309 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 H3BRM9 83 aa4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 VPREB1P12018 145 aa4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 UBE2AP49459 152 aa4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 LINC00310P59036 64 aa4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 SND1-IT1Q9HBX3 110 aa4.72□□□□□ -1.65
CTNNA1-215ENST00000519309 IGKV2-28A0A075B6P5 120 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 ATP5LO75964 103 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 IGKV2D-28P01615 120 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 C3orf22Q8N5N4 141 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 ERG28Q9UKR5 140 aa4.71□□□□□ -1.66
CTNNA1-215ENST00000519309 TMEM238C9JI98 176 aa4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 TMEM170BQ5T4T1 132 aa4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 XP32Q5T750 250 aa4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 FAM19A2Q8N3H0 131 aa4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 CHTOPQ9Y3Y2 248 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-215ENST00000519309 TMEM223A0PJW6 202 aa4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 TRGC2P03986 189 aa4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 SLC7A5P1Q8MH63 180 aa4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 NKAPP1Q8N9T2 125 aa4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 IFI27L1Q96BM0 104 aa4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 CHCHD1Q96BP2 118 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-215ENST00000519309 TRAV12-1A0A0B4J245 112 aa4.68□□□□□ -1.66
CTNNA1-215ENST00000519309 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
CTNNA1-215ENST00000519309 PRLHP81277 87 aa4.68□□□□□ -1.66
CTNNA1-215ENST00000519309 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
CTNNA1-215ENST00000519309 M0R378 163 aa4.67□□□□□ -1.66
CTNNA1-215ENST00000519309 TSPEAR-AS2P59090 65 aa4.67□□□□□ -1.66
CTNNA1-215ENST00000519309 PLEKHB2Q96CS7 222 aa4.67□□□□□ -1.66
CTNNA1-215ENST00000519309 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
CTNNA1-215ENST00000519309 H0Y8G0 127 aa4.66□□□□□ -1.66
CTNNA1-215ENST00000519309 SERF1AO75920 110 aa4.66□□□□□ -1.66
CTNNA1-215ENST00000519309 SMIM13P0DJ93 91 aa4.66□□□□□ -1.66
CTNNA1-215ENST00000519309 COX17Q14061 63 aa4.66□□□□□ -1.66
CTNNA1-215ENST00000519309 DAND5Q8N907 189 aa4.66□□□□□ -1.66
CTNNA1-215ENST00000519309 COLCA2A8K830 154 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 HSBP1O75506 76 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 SPINK1P00995 79 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 LINC00158P58513 81 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 RPS29P62273 56 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 NDUFA12Q9UI09 145 aa4.65□□□□□ -1.67
CTNNA1-215ENST00000519309 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
CTNNA1-215ENST00000519309 MIR7-3HGQ8N6C7 128 aa4.64□□□□□ -1.67
CTNNA1-215ENST00000519309 Q8NBF4 154 aa4.64□□□□□ -1.67
CTNNA1-215ENST00000519309 SPRR4Q96PI1 79 aa4.64□□□□□ -1.67
CTNNA1-215ENST00000519309 NCR3O14931 201 aa4.63□□□□□ -1.67
CTNNA1-215ENST00000519309 RPL24P83731 157 aaKnown RBP4.63□□□□□ -1.67
CTNNA1-215ENST00000519309 LEPROTL1O95214 131 aa4.62□□□□□ -1.67
CTNNA1-215ENST00000519309 FABP4P15090 132 aa4.62□□□□□ -1.67
CTNNA1-215ENST00000519309 SFTA2Q6UW10 78 aa4.62□□□□□ -1.67
CTNNA1-215ENST00000519309 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
CTNNA1-215ENST00000519309 Q8N377 158 aa4.62□□□□□ -1.67
CTNNA1-215ENST00000519309 KRTAP4-16G5E9R7 235 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-215ENST00000519309 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
CTNNA1-215ENST00000519309 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
CTNNA1-215ENST00000519309 ZNF706Q9Y5V0 76 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-215ENST00000519309 LEPROTO15243 131 aa4.6□□□□□ -1.67
CTNNA1-215ENST00000519309 SPRR1AP35321 89 aa4.6□□□□□ -1.67
CTNNA1-215ENST00000519309 HERV-K104P63124 156 aa4.6□□□□□ -1.67
CTNNA1-215ENST00000519309 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
CTNNA1-215ENST00000519309 TRBV10-3A0A0K0K1G6 114 aa4.59□□□□□ -1.67
CTNNA1-215ENST00000519309 J3QQQ9 107 aa4.59□□□□□ -1.67
CTNNA1-215ENST00000519309 DPM2O94777 84 aa4.59□□□□□ -1.67
CTNNA1-215ENST00000519309 PLNP26678 52 aa4.59□□□□□ -1.67
CTNNA1-215ENST00000519309 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms