RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 C6orf48Q9UBA6 75 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 UBE2D1P51668 147 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 PRR4Q16378 134 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 RNF151Q2KHN1 245 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 C14orf144Q96I85 54 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 UQCR10Q9UDW1 63 aa5.23□□□□□ -1.57
TRIM35-202ENST00000519219 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
TRIM35-202ENST00000519219 IGHV3OR16-9A0A0B4J2B5 98 aa5.22□□□□□ -1.57
TRIM35-202ENST00000519219 ZNF22P17026 224 aaPredicted RBP5.22□□□□□ -1.57
TRIM35-202ENST00000519219 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
TRIM35-202ENST00000519219 GAGE2EQ4V326 116 aa5.22□□□□□ -1.57
TRIM35-202ENST00000519219 SLC25A34Q6PIV7 304 aa5.22□□□□□ -1.57
TRIM35-202ENST00000519219 GAGE2DQ9UEU5 116 aa5.22□□□□□ -1.57
TRIM35-202ENST00000519219 IGLV1-50A0A075B6I6 118 aa5.21□□□□□ -1.58
TRIM35-202ENST00000519219 E9PLD3 99 aa5.21□□□□□ -1.58
TRIM35-202ENST00000519219 DDTP30046 118 aa5.21□□□□□ -1.58
TRIM35-202ENST00000519219 MIEN1Q9BRT3 115 aa5.21□□□□□ -1.58
TRIM35-202ENST00000519219 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 M0QXV9 152 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 NDUFA1O15239 70 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 SPINK8P0C7L1 97 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 TLX1NBP0CAT3 122 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 COX8AP10176 69 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 C9orf129Q5T035 196 aaKnown RBP5.2□□□□□ -1.58
TRIM35-202ENST00000519219 LINC00242Q5T6M2 205 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 PLEKHB2Q96CS7 222 aa5.2□□□□□ -1.58
TRIM35-202ENST00000519219 IGKV2D-26A0A0A0MRZ7 120 aa5.19□□□□□ -1.58
TRIM35-202ENST00000519219 ZNF815PA8K554 130 aa5.19□□□□□ -1.58
TRIM35-202ENST00000519219 LEPROTO15243 131 aa5.19□□□□□ -1.58
TRIM35-202ENST00000519219 CDKN2A-AS1Q9UH64 79 aa5.19□□□□□ -1.58
TRIM35-202ENST00000519219 J3QQQ9 107 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 TSPAN13O95857 204 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 UBE2BP63146 152 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
TRIM35-202ENST00000519219 SCGB1D4Q6XE38 83 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
TRIM35-202ENST00000519219 IGLV5-45A0A087WSX0 123 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 MYMXA0A1B0GTQ4 84 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 DLEU1O43261 78 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 PRSS2P07478 247 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 BOD1L2Q8IYS8 172 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 TOMM7Q9P0U1 55 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 TP73-AS1Q9UF72 201 aa5.17□□□□□ -1.58
TRIM35-202ENST00000519219 A0A087X002 238 aa5.16□□□□□ -1.58
TRIM35-202ENST00000519219 F8WDY8 70 aa5.16□□□□□ -1.58
TRIM35-202ENST00000519219 CTAG1AP78358 180 aa5.16□□□□□ -1.58
TRIM35-202ENST00000519219 BATFQ16520 125 aa5.16□□□□□ -1.58
TRIM35-202ENST00000519219 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
TRIM35-202ENST00000519219 LINC00587B1AMM8 73 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 M0R143 59 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 TSPEAR-AS2P59090 65 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 COX7B2Q8TF08 81 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
TRIM35-202ENST00000519219 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
TRIM35-202ENST00000519219 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
TRIM35-202ENST00000519219 HIST1H4GQ99525 98 aa5.14□□□□□ -1.59
TRIM35-202ENST00000519219 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
TRIM35-202ENST00000519219 IGLV5-39A0A0G2JS06 123 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 TRBV30A0A0K0K1B3 111 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 ZNF861PO60384 105 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 CKS1BP61024 79 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 HSD52Q0P140 79 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 C6orf226Q5I0X4 101 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 MEIG1Q5JSS6 88 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 SFTA2Q6UW10 78 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 LINC01561Q8N1V8 128 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 RETNLBQ9BQ08 111 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 XAGE1AQ9HD64 81 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 HIGD1BQ9P298 99 aa5.13□□□□□ -1.59
TRIM35-202ENST00000519219 HINT1P49773 126 aaPredicted RBP5.12□□□□□ -1.59
TRIM35-202ENST00000519219 HERV-K104P63124 156 aa5.12□□□□□ -1.59
TRIM35-202ENST00000519219 C2orf91Q6ZV80 131 aa5.12□□□□□ -1.59
TRIM35-202ENST00000519219 Q8IZM0 81 aa5.12□□□□□ -1.59
TRIM35-202ENST00000519219 C22orf24Q9Y442 160 aa5.12□□□□□ -1.59
TRIM35-202ENST00000519219 A0A0J9YXY3 114 aa5.11□□□□□ -1.59
TRIM35-202ENST00000519219 CXCL5P42830 114 aa5.11□□□□□ -1.59
TRIM35-202ENST00000519219 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
TRIM35-202ENST00000519219 TMEM238LA0A1B0GVL6 79 aa5.1□□□□□ -1.59
TRIM35-202ENST00000519219 A6NDN8 102 aa5.1□□□□□ -1.59
TRIM35-202ENST00000519219 A6NJY4 79 aa5.1□□□□□ -1.59
TRIM35-202ENST00000519219 TAL2Q16559 108 aa5.1□□□□□ -1.59
TRIM35-202ENST00000519219 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
TRIM35-202ENST00000519219 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
TRIM35-202ENST00000519219 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
TRIM35-202ENST00000519219 CEND1Q8N111 149 aa5.09□□□□□ -1.59
TRIM35-202ENST00000519219 TYMSOSQ8TAI1 123 aa5.09□□□□□ -1.59
TRIM35-202ENST00000519219 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
TRIM35-202ENST00000519219 SPANXB1Q9NS25 103 aaPredicted RBP5.09□□□□□ -1.59
TRIM35-202ENST00000519219 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 GAGE10A6NGK3 116 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 BCE1O60756 84 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 TIMM17BO60830 172 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms